RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 KIF3CO14782 793 aa26.37■■□□□ 1.81
GTF3A-203ENST00000435781 RABL6Q3YEC7 729 aaPredicted RBP26.37■■□□□ 1.81
GTF3A-203ENST00000435781 NIM1KQ8IY84 436 aa26.37■■□□□ 1.81
GTF3A-203ENST00000435781 TBC1D16Q8TBP0 767 aa26.37■■□□□ 1.81
GTF3A-203ENST00000435781 MINPP1Q9UNW1 487 aa26.37■■□□□ 1.81
GTF3A-203ENST00000435781 XDHP47989 1333 aa26.37■■□□□ 1.81
GTF3A-203ENST00000435781 CCDC57Q2TAC2 916 aa26.36■■□□□ 1.81
GTF3A-203ENST00000435781 ANKRD44Q8N8A2 993 aa26.36■■□□□ 1.81
GTF3A-203ENST00000435781 CLUAP1Q96AJ1 413 aa26.36■■□□□ 1.81
GTF3A-203ENST00000435781 MPHOSPH8Q99549 860 aa26.36■■□□□ 1.81
GTF3A-203ENST00000435781 GGA1Q9UJY5 639 aa26.36■■□□□ 1.81
GTF3A-203ENST00000435781 SCN4AP35499 1836 aa26.36■■□□□ 1.81
GTF3A-203ENST00000435781 DDNO94850 711 aaPredicted RBP26.35■■□□□ 1.81
GTF3A-203ENST00000435781 UFL1O94874 794 aa26.35■■□□□ 1.81
GTF3A-203ENST00000435781 RRAGCQ9HB90 399 aa26.35■■□□□ 1.81
GTF3A-203ENST00000435781 WASHC4Q2M389 1173 aa26.34■■□□□ 1.81
GTF3A-203ENST00000435781 GPR101Q96P66 508 aaPredicted RBP26.34■■□□□ 1.81
GTF3A-203ENST00000435781 EYA3Q99504 573 aa26.34■■□□□ 1.81
GTF3A-203ENST00000435781 UBTFL1P0CB47 393 aaPredicted RBP26.33■■□□□ 1.81
GTF3A-203ENST00000435781 EIF6P56537 245 aaKnown RBP26.33■■□□□ 1.81
GTF3A-203ENST00000435781 ZNF594Q96JF6 807 aaPredicted RBP26.33■■□□□ 1.81
GTF3A-203ENST00000435781 SCN9AQ15858 1988 aa26.33■■□□□ 1.8
GTF3A-203ENST00000435781 RIMBP2O15034 1052 aa26.32■■□□□ 1.8
GTF3A-203ENST00000435781 ATP2B4P23634 1241 aa26.32■■□□□ 1.8
GTF3A-203ENST00000435781 TAF7LQ5H9L4 462 aa26.32■■□□□ 1.8
GTF3A-203ENST00000435781 MEIS3Q99687 375 aa26.32■■□□□ 1.8
GTF3A-203ENST00000435781 ZNRF3Q9ULT6 936 aa26.32■■□□□ 1.8
GTF3A-203ENST00000435781 PSME4Q14997 1843 aa26.31■■□□□ 1.8
GTF3A-203ENST00000435781 POTECB2RU33 542 aa26.3■■□□□ 1.8
GTF3A-203ENST00000435781 VEGFAP15692 232 aaPredicted RBP26.3■■□□□ 1.8
GTF3A-203ENST00000435781 GPC2Q8N158 579 aa26.3■■□□□ 1.8
GTF3A-203ENST00000435781 L3MBTL3Q96JM7 780 aaPredicted RBP26.3■■□□□ 1.8
GTF3A-203ENST00000435781 YTHDC1Q96MU7 727 aaKnown RBP26.3■■□□□ 1.8
GTF3A-203ENST00000435781 ANKRD2Q9GZV1 360 aa26.3■■□□□ 1.8
GTF3A-203ENST00000435781 WTIPA6NIX2 430 aaPredicted RBP26.29■■□□□ 1.8
GTF3A-203ENST00000435781 CHRNDQ07001 517 aa26.29■■□□□ 1.8
GTF3A-203ENST00000435781 LDHAL6AQ6ZMR3 332 aa26.29■■□□□ 1.8
GTF3A-203ENST00000435781 TMEM57Q8N5G2 664 aa26.29■■□□□ 1.8
GTF3A-203ENST00000435781 ZC3H12CQ9C0D7 883 aaKnown RBP26.29■■□□□ 1.8
GTF3A-203ENST00000435781 RCAN3Q9UKA8 241 aa26.29■■□□□ 1.8
GTF3A-203ENST00000435781 YDJCA8MPS7 323 aa26.28■■□□□ 1.8
GTF3A-203ENST00000435781 DBNDD1Q9H9R9 158 aa26.28■■□□□ 1.8
GTF3A-203ENST00000435781 HDAC5Q9UQL6 1122 aa26.28■■□□□ 1.8
GTF3A-203ENST00000435781 LRRFIP2Q9Y608 721 aaKnown RBP26.28■■□□□ 1.8
GTF3A-203ENST00000435781 GJA3Q9Y6H8 435 aa26.28■■□□□ 1.8
GTF3A-203ENST00000435781 GNAI3P08754 354 aa26.27■■□□□ 1.8
GTF3A-203ENST00000435781 CXCL9Q07325 125 aa26.27■■□□□ 1.8
GTF3A-203ENST00000435781 FTSJ3Q8IY81 847 aaKnown RBP26.27■■□□□ 1.8
GTF3A-203ENST00000435781 DZIP1LQ8IYY4 767 aaKnown RBP26.27■■□□□ 1.8
GTF3A-203ENST00000435781 CNNM1Q9NRU3 951 aa26.27■■□□□ 1.8
GTF3A-203ENST00000435781 LEMD3Q9Y2U8 911 aa26.27■■□□□ 1.8
GTF3A-203ENST00000435781 MED23Q9ULK4 1368 aa26.26■■□□□ 1.79
GTF3A-203ENST00000435781 RLBP1P12271 317 aa26.26■■□□□ 1.79
GTF3A-203ENST00000435781 DOK7Q18PE1 504 aa26.26■■□□□ 1.79
GTF3A-203ENST00000435781 ECE2O60344 883 aa26.25■■□□□ 1.79
GTF3A-203ENST00000435781 HELBQ8NG08 1087 aaPredicted RBP26.25■■□□□ 1.79
GTF3A-203ENST00000435781 PUS3Q9BZE2 481 aaKnown RBP26.25■■□□□ 1.79
GTF3A-203ENST00000435781 ZNF804BA4D1E1 1349 aa26.24■■□□□ 1.79
GTF3A-203ENST00000435781 RAD17O75943 681 aa26.24■■□□□ 1.79
GTF3A-203ENST00000435781 C1QTNF8P60827 252 aa26.24■■□□□ 1.79
GTF3A-203ENST00000435781 CIAPIN1Q6FI81 312 aa26.24■■□□□ 1.79
GTF3A-203ENST00000435781 C16orf71Q8IYS4 520 aaPredicted RBP26.24■■□□□ 1.79
GTF3A-203ENST00000435781 IQCA1LA6NCM1 817 aa26.23■■□□□ 1.79
GTF3A-203ENST00000435781 TAF5LO75529 589 aa26.23■■□□□ 1.79
GTF3A-203ENST00000435781 TOMM70O94826 608 aa26.23■■□□□ 1.79
GTF3A-203ENST00000435781 RFX5P48382 616 aaPredicted RBP26.23■■□□□ 1.79
GTF3A-203ENST00000435781 ZNF646O15015 1829 aaPredicted RBP26.23■■□□□ 1.79
GTF3A-203ENST00000435781 G3V3G9 751 aa26.22■■□□□ 1.79
GTF3A-203ENST00000435781 KCNJ4P48050 445 aa26.22■■□□□ 1.79
GTF3A-203ENST00000435781 DCAF8Q5TAQ9 597 aa26.22■■□□□ 1.79
GTF3A-203ENST00000435781 KLHDC4Q8TBB5 520 aa26.22■■□□□ 1.79
GTF3A-203ENST00000435781 RIPOR2Q9Y4F9 1068 aa26.22■■□□□ 1.79
GTF3A-203ENST00000435781 SNAP23O00161 211 aa26.21■■□□□ 1.79
GTF3A-203ENST00000435781 TNIP1Q15025 636 aa26.21■■□□□ 1.79
GTF3A-203ENST00000435781 KLRK1P26718 216 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 SCNN1DP51172 638 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 LRRC24Q50LG9 513 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 TXNRD3Q86VQ6 643 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 ITPRIPQ8IWB1 547 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 RBM46Q8TBY0 533 aaKnown RBP26.2■■□□□ 1.78
GTF3A-203ENST00000435781 PANK1Q8TE04 598 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 TAF1DQ9H5J8 278 aaPredicted RBP26.2■■□□□ 1.78
GTF3A-203ENST00000435781 KCNQ5Q9NR82 932 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 HACL1Q9UJ83 578 aa26.2■■□□□ 1.78
GTF3A-203ENST00000435781 PLIN1O60240 522 aa26.19■■□□□ 1.78
GTF3A-203ENST00000435781 GNAI2P04899 355 aa26.19■■□□□ 1.78
GTF3A-203ENST00000435781 PTPN12Q05209 780 aaKnown RBP26.19■■□□□ 1.78
GTF3A-203ENST00000435781 MROH5Q6ZUA9 1318 aa26.18■■□□□ 1.78
GTF3A-203ENST00000435781 IRS2Q9Y4H2 1338 aa26.18■■□□□ 1.78
GTF3A-203ENST00000435781 ADAMTSL1Q8N6G6 1762 aa26.18■■□□□ 1.78
GTF3A-203ENST00000435781 PSMD14O00487 310 aa26.18■■□□□ 1.78
GTF3A-203ENST00000435781 GMPSP49915 693 aaPredicted RBP26.18■■□□□ 1.78
GTF3A-203ENST00000435781 MS4A1P11836 297 aa26.17■■□□□ 1.78
GTF3A-203ENST00000435781 LMOD1P29536 600 aaPredicted RBP26.17■■□□□ 1.78
GTF3A-203ENST00000435781 C15orf52Q6ZUT6 534 aaKnown RBP26.17■■□□□ 1.78
GTF3A-203ENST00000435781 EPHX2P34913 555 aa26.16■■□□□ 1.78
GTF3A-203ENST00000435781 MTX1Q13505 466 aa26.16■■□□□ 1.78
GTF3A-203ENST00000435781 PODNQ7Z5L7 613 aa26.16■■□□□ 1.78
GTF3A-203ENST00000435781 COA1Q9GZY4 146 aa26.16■■□□□ 1.78
GTF3A-203ENST00000435781 GPRC5DQ9NZD1 345 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms