RNA–Protein interactions for RNA: ENST00000434944.1

LINC00475-206, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-206ENST00000434944 GPR25O00155 361 aa12.84□□□□□ -0.35
LINC00475-206ENST00000434944 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
LINC00475-206ENST00000434944 GPSM2P81274 684 aa12.84□□□□□ -0.35
LINC00475-206ENST00000434944 FBXO46Q6PJ61 603 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-206ENST00000434944 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-206ENST00000434944 TRMT112Q9UI30 125 aaKnown RBP12.84□□□□□ -0.35
LINC00475-206ENST00000434944 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
LINC00475-206ENST00000434944 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
LINC00475-206ENST00000434944 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
LINC00475-206ENST00000434944 TRIOBPQ9H2D6 2365 aa12.84□□□□□ -0.35
LINC00475-206ENST00000434944 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
LINC00475-206ENST00000434944 AIMP1Q12904 312 aaKnown RBP12.83□□□□□ -0.36
LINC00475-206ENST00000434944 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.36
LINC00475-206ENST00000434944 SCARF1Q14162 830 aa12.83□□□□□ -0.36
LINC00475-206ENST00000434944 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
LINC00475-206ENST00000434944 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
LINC00475-206ENST00000434944 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
LINC00475-206ENST00000434944 VIL1P09327 827 aaKnown RBP12.82□□□□□ -0.36
LINC00475-206ENST00000434944 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
LINC00475-206ENST00000434944 TRIM26Q12899 539 aaPredicted RBP12.82□□□□□ -0.36
LINC00475-206ENST00000434944 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
LINC00475-206ENST00000434944 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
LINC00475-206ENST00000434944 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
LINC00475-206ENST00000434944 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00475-206ENST00000434944 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
LINC00475-206ENST00000434944 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
LINC00475-206ENST00000434944 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
LINC00475-206ENST00000434944 FKTNO75072 461 aa12.8□□□□□ -0.36
LINC00475-206ENST00000434944 TM4SF4P48230 202 aa12.8□□□□□ -0.36
LINC00475-206ENST00000434944 ZNF280AP59817 542 aaPredicted RBP12.8□□□□□ -0.36
LINC00475-206ENST00000434944 FKBP1BP68106 108 aa12.8□□□□□ -0.36
LINC00475-206ENST00000434944 TCIRG1Q13488 830 aa12.8□□□□□ -0.36
LINC00475-206ENST00000434944 TBC1D16Q8TBP0 767 aa12.8□□□□□ -0.36
LINC00475-206ENST00000434944 PSME4Q14997 1843 aa12.79□□□□□ -0.36
LINC00475-206ENST00000434944 HSP90AB3PQ58FF7 597 aa12.79□□□□□ -0.36
LINC00475-206ENST00000434944 EYA3Q99504 573 aa12.79□□□□□ -0.36
LINC00475-206ENST00000434944 HTTP42858 3142 aa12.78□□□□□ -0.36
LINC00475-206ENST00000434944 TTLL12Q14166 644 aaPredicted RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
LINC00475-206ENST00000434944 FAM89AQ96GI7 184 aa12.78□□□□□ -0.36
LINC00475-206ENST00000434944 ZC3H12CQ9C0D7 883 aaKnown RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
LINC00475-206ENST00000434944 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
LINC00475-206ENST00000434944 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
LINC00475-206ENST00000434944 GMLQ99445 158 aa12.77□□□□□ -0.37
LINC00475-206ENST00000434944 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.37
LINC00475-206ENST00000434944 TRIM17Q9Y577 477 aa12.77□□□□□ -0.37
LINC00475-206ENST00000434944 CENPFP49454 3210 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 G3V3G9 751 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 UFL1O94874 794 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
LINC00475-206ENST00000434944 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
LINC00475-206ENST00000434944 RBBP6Q7Z6E9 1792 aaKnown RBP12.76□□□□□ -0.37
LINC00475-206ENST00000434944 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
LINC00475-206ENST00000434944 EN2P19622 333 aaPredicted RBP12.75□□□□□ -0.37
LINC00475-206ENST00000434944 PTPN12Q05209 780 aaKnown RBP12.75□□□□□ -0.37
LINC00475-206ENST00000434944 PRKG1Q13976 671 aa12.75□□□□□ -0.37
LINC00475-206ENST00000434944 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
LINC00475-206ENST00000434944 CFHR5Q9BXR6 569 aa12.75□□□□□ -0.37
LINC00475-206ENST00000434944 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
LINC00475-206ENST00000434944 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
LINC00475-206ENST00000434944 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
LINC00475-206ENST00000434944 ZNF609O15014 1411 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 NEFMP07197 916 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 SREBF2Q12772 1141 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 MXD3Q9BW11 206 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
LINC00475-206ENST00000434944 ANKIB1Q9P2G1 1089 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 FZD1Q9UP38 647 aa12.74□□□□□ -0.37
LINC00475-206ENST00000434944 WTIPA6NIX2 430 aaPredicted RBP12.73□□□□□ -0.37
LINC00475-206ENST00000434944 GGA1Q9UJY5 639 aa12.73□□□□□ -0.37
LINC00475-206ENST00000434944 BRCA2P51587 3418 aa12.72□□□□□ -0.37
LINC00475-206ENST00000434944 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
LINC00475-206ENST00000434944 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-206ENST00000434944 CAP1Q01518 475 aa12.72□□□□□ -0.37
LINC00475-206ENST00000434944 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
LINC00475-206ENST00000434944 INTS3Q68E01 1043 aaKnown RBP12.72□□□□□ -0.37
LINC00475-206ENST00000434944 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
LINC00475-206ENST00000434944 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-206ENST00000434944 USP17L3A6NCW0 530 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 USP17L4A6NCW7 530 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 WNT10BO00744 389 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
LINC00475-206ENST00000434944 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00475-206ENST00000434944 SASH1O94885 1247 aa12.7□□□□□ -0.38
LINC00475-206ENST00000434944 NF2P35240 595 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms