RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 ZMYND15Q9H091 742 aa14.05□□□□□ -0.16
UBE3B-203ENST00000434735 LGR6Q9HBX8 967 aa14.05□□□□□ -0.16
UBE3B-203ENST00000434735 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
UBE3B-203ENST00000434735 ZBED4O75132 1171 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 CIZ1Q9ULV3 898 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-203ENST00000434735 RAD17O75943 681 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 NAPAP54920 295 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 DPH6Q7L8W6 267 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 M0QZ92 97 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBE3B-203ENST00000434735 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 EVI5LQ96CN4 794 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 MYCLP12524 364 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-203ENST00000434735 USP8P40818 1118 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 SKIDA1Q1XH10 827 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 C2orf69Q8N8R5 385 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 LINS1Q8NG48 757 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 CALML4Q96GE6 196 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 C8orf76Q96K31 380 aa14.04□□□□□ -0.16
UBE3B-203ENST00000434735 GJD4Q96KN9 370 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-203ENST00000434735 ALDH1L1O75891 902 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 CALRP27797 417 aaKnown RBP14.03□□□□□ -0.16
UBE3B-203ENST00000434735 RPS8P62241 208 aaKnown RBP14.03□□□□□ -0.16
UBE3B-203ENST00000434735 RABEP1Q15276 862 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 SEPT7Q16181 437 aaKnown RBP14.03□□□□□ -0.16
UBE3B-203ENST00000434735 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 GPCPD1Q9NPB8 672 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 ANKRD62A6NC57 917 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 TCERG1LQ5VWI1 586 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 TTLL6Q8N841 843 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 TSG101Q99816 390 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
UBE3B-203ENST00000434735 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
UBE3B-203ENST00000434735 CCDC93Q567U6 631 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 UGGT1Q9NYU2 1555 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 PPEF1O14829 653 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-203ENST00000434735 PHACTR2O75167 634 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 SERPINC1P01008 464 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 FCHSD1Q86WN1 690 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 PLBD2Q8NHP8 589 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 MMRN2Q9H8L6 949 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 DACH1Q9UI36 760 aa14.03□□□□□ -0.16
UBE3B-203ENST00000434735 CLRN2A0PK11 232 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 IARSP41252 1262 aaKnown RBP14.02□□□□□ -0.16
UBE3B-203ENST00000434735 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-203ENST00000434735 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.16
UBE3B-203ENST00000434735 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.16
UBE3B-203ENST00000434735 MFSD14BQ5SR56 506 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 WDR66Q8TBY9 1149 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 ERVV-2B6SEH9 535 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 CCDC174Q6PII3 467 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 TXLNBQ8N3L3 684 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 ERMNQ8TAM6 284 aa14.02□□□□□ -0.16
UBE3B-203ENST00000434735 KRT23Q9C075 422 aa14.02□□□□□ -0.17
UBE3B-203ENST00000434735 C21orf2O43822 256 aa14.02□□□□□ -0.17
UBE3B-203ENST00000434735 NOP2P46087 812 aaKnown RBP14.02□□□□□ -0.17
UBE3B-203ENST00000434735 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
UBE3B-203ENST00000434735 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 METAP2P50579 478 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 TEKT1Q969V4 418 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 SLFN5Q08AF3 891 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 KRT24Q2M2I5 525 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 ZBTB24O43167 697 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 STXBP4Q6ZWJ1 553 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 ZSCAN31Q96LW9 406 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 USP16Q9Y5T5 823 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 UPF3BQ9BZI7 483 aaKnown RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 TAOK3Q9H2K8 898 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 DPP9Q86TI2 863 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 CCDC83Q8IWF9 413 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 RNF169Q8NCN4 708 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 DBNDD1Q9H9R9 158 aa14.01□□□□□ -0.17
UBE3B-203ENST00000434735 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBE3B-203ENST00000434735 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
UBE3B-203ENST00000434735 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
UBE3B-203ENST00000434735 NFKBIBQ15653 356 aa14□□□□□ -0.17
UBE3B-203ENST00000434735 NCAPG2Q86XI2 1143 aa14□□□□□ -0.17
UBE3B-203ENST00000434735 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
UBE3B-203ENST00000434735 LETM1O95202 739 aaPredicted RBP14□□□□□ -0.17
UBE3B-203ENST00000434735 ZFYP08048 801 aaPredicted RBP14□□□□□ -0.17
UBE3B-203ENST00000434735 ANAPC15P60006 121 aa14□□□□□ -0.17
UBE3B-203ENST00000434735 CCDC117Q8IWD4 279 aaPredicted RBP14□□□□□ -0.17
UBE3B-203ENST00000434735 SLC10A4Q96EP9 437 aa14□□□□□ -0.17
UBE3B-203ENST00000434735 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
UBE3B-203ENST00000434735 ZNF594Q96JF6 807 aaPredicted RBP14□□□□□ -0.17
UBE3B-203ENST00000434735 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
UBE3B-203ENST00000434735 COMMD10Q9Y6G5 202 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms