RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 C2orf69Q8N8R5 385 aa17.34■□□□□ 0.37
CDC42EP1-204ENST00000434728 POLLQ9UGP5 575 aa17.34■□□□□ 0.37
CDC42EP1-204ENST00000434728 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
CDC42EP1-204ENST00000434728 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.37
CDC42EP1-204ENST00000434728 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
CDC42EP1-204ENST00000434728 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
CDC42EP1-204ENST00000434728 POLR2AP24928 1970 aaKnown RBP17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 UFL1O94874 794 aa17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 KIF4BQ2VIQ3 1234 aa17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 TBC1D16Q8TBP0 767 aa17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP1-204ENST00000434728 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP1-204ENST00000434728 TRIM28Q13263 835 aaKnown RBP17.31■□□□□ 0.36
CDC42EP1-204ENST00000434728 MYD88Q99836 296 aa17.31■□□□□ 0.36
CDC42EP1-204ENST00000434728 GGA1Q9UJY5 639 aa17.31■□□□□ 0.36
CDC42EP1-204ENST00000434728 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 DDX58O95786 925 aaKnown RBP17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 GNAI1P63096 354 aa17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 MLLT1Q03111 559 aaPredicted RBP17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 RGMBQ6NW40 437 aa17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
CDC42EP1-204ENST00000434728 ZNF157P51786 506 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 DGKZQ13574 1117 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 DLK2Q6UY11 383 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 MCOLN1Q9GZU1 580 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 SEC31BQ9NQW1 1179 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 KCNQ5Q9NR82 932 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
CDC42EP1-204ENST00000434728 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
CDC42EP1-204ENST00000434728 PDE8AO60658 829 aa17.28■□□□□ 0.36
CDC42EP1-204ENST00000434728 EGFRP00533 1210 aa17.28■□□□□ 0.36
CDC42EP1-204ENST00000434728 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
CDC42EP1-204ENST00000434728 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
CDC42EP1-204ENST00000434728 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
CDC42EP1-204ENST00000434728 COL4A1P02462 1669 aa17.27■□□□□ 0.36
CDC42EP1-204ENST00000434728 PCCAP05165 728 aaPredicted RBP17.27■□□□□ 0.36
CDC42EP1-204ENST00000434728 PODXL2Q9NZ53 605 aa17.27■□□□□ 0.36
CDC42EP1-204ENST00000434728 SCN9AQ15858 1988 aa17.26■□□□□ 0.35
CDC42EP1-204ENST00000434728 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
CDC42EP1-204ENST00000434728 APAF1O14727 1248 aa17.26■□□□□ 0.35
CDC42EP1-204ENST00000434728 VIL1P09327 827 aaKnown RBP17.26■□□□□ 0.35
CDC42EP1-204ENST00000434728 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
CDC42EP1-204ENST00000434728 XDHP47989 1333 aa17.25■□□□□ 0.35
CDC42EP1-204ENST00000434728 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
CDC42EP1-204ENST00000434728 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
CDC42EP1-204ENST00000434728 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
CDC42EP1-204ENST00000434728 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 NEXNQ0ZGT2 675 aa17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 ANGEL2Q5VTE6 544 aaKnown RBP17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 RSBN1LQ6PCB5 846 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 METTL22Q9BUU2 404 aaPredicted RBP17.24■□□□□ 0.35
CDC42EP1-204ENST00000434728 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
CDC42EP1-204ENST00000434728 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
CDC42EP1-204ENST00000434728 SCARF1Q14162 830 aa17.23■□□□□ 0.35
CDC42EP1-204ENST00000434728 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
CDC42EP1-204ENST00000434728 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
CDC42EP1-204ENST00000434728 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
CDC42EP1-204ENST00000434728 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 MYH3P11055 1940 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 USP17L3A6NCW0 530 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 USP17L4A6NCW7 530 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 TRPA1O75762 1119 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 CTSWP56202 376 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 USP17L1Q7RTZ2 530 aa17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP1-204ENST00000434728 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP1-204ENST00000434728 PSME4Q14997 1843 aa17.21■□□□□ 0.35
CDC42EP1-204ENST00000434728 C8orf58Q8NAV2 365 aa17.21■□□□□ 0.35
CDC42EP1-204ENST00000434728 MYOZ2Q9NPC6 264 aa17.21■□□□□ 0.35
CDC42EP1-204ENST00000434728 SLC10A3P09131 477 aa17.2■□□□□ 0.34
CDC42EP1-204ENST00000434728 ZNF280AP59817 542 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP1-204ENST00000434728 TTLL12Q14166 644 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP1-204ENST00000434728 PODNQ7Z5L7 613 aa17.2■□□□□ 0.34
CDC42EP1-204ENST00000434728 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
CDC42EP1-204ENST00000434728 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
CDC42EP1-204ENST00000434728 FKBP1BP68106 108 aa17.19■□□□□ 0.34
CDC42EP1-204ENST00000434728 KSR2Q6VAB6 950 aa17.19■□□□□ 0.34
CDC42EP1-204ENST00000434728 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
CDC42EP1-204ENST00000434728 RNF186Q9NXI6 227 aa17.19■□□□□ 0.34
CDC42EP1-204ENST00000434728 PAPPA2Q9BXP8 1791 aa17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 NF2P35240 595 aa17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 RGS19P49795 217 aa17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 ZNF609O15014 1411 aa17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
CDC42EP1-204ENST00000434728 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms