RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 RTN4Q9NQC3 1192 aaKnown RBP22.38■■□□□ 1.17
FAM3A-212ENST00000434658 GPTP24298 496 aa22.38■■□□□ 1.17
FAM3A-212ENST00000434658 GRPEL1Q9HAV7 217 aa22.38■■□□□ 1.17
FAM3A-212ENST00000434658 AFDNP55196 1824 aaKnown RBP22.37■■□□□ 1.17
FAM3A-212ENST00000434658 C10orf71Q711Q0 1435 aa22.37■■□□□ 1.17
FAM3A-212ENST00000434658 FAM177BA6PVY3 158 aa22.37■■□□□ 1.17
FAM3A-212ENST00000434658 NEURL1BA8MQ27 555 aa22.37■■□□□ 1.17
FAM3A-212ENST00000434658 IFIT2P09913 472 aaKnown RBP22.37■■□□□ 1.17
FAM3A-212ENST00000434658 NBPF5PQ86XG9 351 aaPredicted RBP22.37■■□□□ 1.17
FAM3A-212ENST00000434658 ZNF34Q8IZ26 560 aa22.37■■□□□ 1.17
FAM3A-212ENST00000434658 METTL22Q9BUU2 404 aaPredicted RBP22.37■■□□□ 1.17
FAM3A-212ENST00000434658 NPHP1O15259 732 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 HSP90AB3PQ58FF7 597 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 TCIRG1Q13488 830 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 GCKRQ14397 625 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 PRR5LQ6MZQ0 368 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 FAM43AQ8N2R8 423 aa22.36■■□□□ 1.17
FAM3A-212ENST00000434658 DDX49Q9Y6V7 483 aaKnown RBP22.36■■□□□ 1.17
FAM3A-212ENST00000434658 NRXN2Q9P2S2 1712 aa22.35■■□□□ 1.17
FAM3A-212ENST00000434658 TPTE2Q6XPS3 522 aa22.35■■□□□ 1.17
FAM3A-212ENST00000434658 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
FAM3A-212ENST00000434658 CNBD1Q8NA66 436 aa22.35■■□□□ 1.17
FAM3A-212ENST00000434658 RUFY2Q8WXA3 655 aa22.35■■□□□ 1.17
FAM3A-212ENST00000434658 LMBRD1Q9NUN5 540 aa22.35■■□□□ 1.17
FAM3A-212ENST00000434658 SASH1O94885 1247 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 TGFB2P61812 414 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 G3BP1Q13283 466 aaKnown RBP eCLIP22.34■■□□□ 1.17
FAM3A-212ENST00000434658 KIAA1211Q6ZU35 1233 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 AACSQ86V21 672 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 PANK2Q9BZ23 570 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 UPF3BQ9BZI7 483 aaKnown RBP22.34■■□□□ 1.17
FAM3A-212ENST00000434658 DIAPH3Q9NSV4 1193 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 SNX14Q9Y5W7 946 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 UBN2Q6ZU65 1347 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 SUSD4Q5VX71 490 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 CWC27Q6UX04 472 aaKnown RBP22.34■■□□□ 1.17
FAM3A-212ENST00000434658 EVI5LQ96CN4 794 aa22.34■■□□□ 1.17
FAM3A-212ENST00000434658 KIF13BQ9NQT8 1826 aa22.33■■□□□ 1.17
FAM3A-212ENST00000434658 MYD88Q99836 296 aa22.33■■□□□ 1.16
FAM3A-212ENST00000434658 A0A0G2JLW4 131 aa22.32■■□□□ 1.16
FAM3A-212ENST00000434658 BRD1O95696 1058 aa22.32■■□□□ 1.16
FAM3A-212ENST00000434658 ST5P78524 1137 aa22.32■■□□□ 1.16
FAM3A-212ENST00000434658 PARP10Q53GL7 1025 aa22.32■■□□□ 1.16
FAM3A-212ENST00000434658 GAS2L3Q86XJ1 694 aa22.32■■□□□ 1.16
FAM3A-212ENST00000434658 ANKRD36CQ5JPF3 1778 aa22.32■■□□□ 1.16
FAM3A-212ENST00000434658 GTF2E1P29083 439 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-212ENST00000434658 NYXQ9GZU5 481 aa22.31■■□□□ 1.16
FAM3A-212ENST00000434658 ATP5J2-PTCD1G3V325 749 aa22.31■■□□□ 1.16
FAM3A-212ENST00000434658 DPEP1P16444 411 aa22.31■■□□□ 1.16
FAM3A-212ENST00000434658 EAF2Q96CJ1 260 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-212ENST00000434658 NLRP10Q86W26 655 aa22.3■■□□□ 1.16
FAM3A-212ENST00000434658 TTC14Q96N46 770 aa22.3■■□□□ 1.16
FAM3A-212ENST00000434658 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
FAM3A-212ENST00000434658 ISCA1Q9BUE6 129 aa22.29■■□□□ 1.16
FAM3A-212ENST00000434658 HIP1O00291 1037 aa22.29■■□□□ 1.16
FAM3A-212ENST00000434658 CHRNA5P30532 468 aa22.29■■□□□ 1.16
FAM3A-212ENST00000434658 RASEFQ8IZ41 740 aa22.29■■□□□ 1.16
FAM3A-212ENST00000434658 UTP14AQ9BVJ6 771 aaKnown RBP22.29■■□□□ 1.16
FAM3A-212ENST00000434658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.29■■□□□ 1.16
FAM3A-212ENST00000434658 NTSR2O95665 410 aa22.28■■□□□ 1.16
FAM3A-212ENST00000434658 PDE6BP35913 854 aa22.28■■□□□ 1.16
FAM3A-212ENST00000434658 EPHA10Q5JZY3 1008 aa22.28■■□□□ 1.16
FAM3A-212ENST00000434658 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
FAM3A-212ENST00000434658 KCNB2Q92953 911 aa22.28■■□□□ 1.16
FAM3A-212ENST00000434658 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
FAM3A-212ENST00000434658 DCAF8L1A6NGE4 600 aa22.27■■□□□ 1.16
FAM3A-212ENST00000434658 ERFEQ4G0M1 354 aa22.27■■□□□ 1.16
FAM3A-212ENST00000434658 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
FAM3A-212ENST00000434658 KIAA1551Q9HCM1 1747 aa22.27■■□□□ 1.16
FAM3A-212ENST00000434658 KCNA3P22001 575 aa22.27■■□□□ 1.15
FAM3A-212ENST00000434658 ZNF445P59923 1031 aa22.27■■□□□ 1.15
FAM3A-212ENST00000434658 RABL6Q3YEC7 729 aaPredicted RBP22.27■■□□□ 1.15
FAM3A-212ENST00000434658 C2CD5Q86YS7 1000 aa22.27■■□□□ 1.15
FAM3A-212ENST00000434658 SNRKQ9NRH2 765 aa22.27■■□□□ 1.15
FAM3A-212ENST00000434658 H0YIN7 160 aa22.26■■□□□ 1.15
FAM3A-212ENST00000434658 TRIM28Q13263 835 aaKnown RBP22.26■■□□□ 1.15
FAM3A-212ENST00000434658 GPR162Q16538 588 aa22.26■■□□□ 1.15
FAM3A-212ENST00000434658 TRMT112Q9UI30 125 aaKnown RBP22.26■■□□□ 1.15
FAM3A-212ENST00000434658 PRPF40AO75400 957 aaKnown RBP22.25■■□□□ 1.15
FAM3A-212ENST00000434658 CCDC8Q9H0W5 538 aaPredicted RBP22.25■■□□□ 1.15
FAM3A-212ENST00000434658 SIL1Q9H173 461 aa22.25■■□□□ 1.15
FAM3A-212ENST00000434658 ANKRD31Q8N7Z5 1873 aa22.25■■□□□ 1.15
FAM3A-212ENST00000434658 CCDC171Q6TFL3 1326 aa22.25■■□□□ 1.15
FAM3A-212ENST00000434658 RFX5P48382 616 aaPredicted RBP22.24■■□□□ 1.15
FAM3A-212ENST00000434658 PTH1RQ03431 593 aa22.24■■□□□ 1.15
FAM3A-212ENST00000434658 TM6SF1Q9BZW5 370 aa22.24■■□□□ 1.15
FAM3A-212ENST00000434658 TLR7Q9NYK1 1049 aaKnown RBP22.24■■□□□ 1.15
FAM3A-212ENST00000434658 PIM2Q9P1W9 311 aa22.24■■□□□ 1.15
FAM3A-212ENST00000434658 ABCC12Q96J65 1359 aa22.23■■□□□ 1.15
FAM3A-212ENST00000434658 AK2P54819 239 aa22.23■■□□□ 1.15
FAM3A-212ENST00000434658 KLHDC4Q8TBB5 520 aa22.23■■□□□ 1.15
FAM3A-212ENST00000434658 CWC25Q9NXE8 425 aaPredicted RBP22.23■■□□□ 1.15
FAM3A-212ENST00000434658 LIMCH1Q9UPQ0 1083 aa22.23■■□□□ 1.15
FAM3A-212ENST00000434658 CAVIN1Q6NZI2 390 aaKnown RBP22.22■■□□□ 1.15
FAM3A-212ENST00000434658 CCDC191Q8NCU4 936 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
FAM3A-212ENST00000434658 YBX3P16989 372 aaKnown RBP eCLIP22.22■■□□□ 1.153e-6■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms