RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 AOC3Q16853 763 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 TBC1D16Q8TBP0 767 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 RCAN3Q9UKA8 241 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
HLA-F-220ENST00000434407 XDHP47989 1333 aa23.08■■□□□ 1.29
HLA-F-220ENST00000434407 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
HLA-F-220ENST00000434407 WDR90Q96KV7 1748 aa23.08■■□□□ 1.29
HLA-F-220ENST00000434407 UBTFL1P0CB47 393 aaPredicted RBP23.08■■□□□ 1.29
HLA-F-220ENST00000434407 ZNF526Q8TF50 670 aaPredicted RBP23.08■■□□□ 1.29
HLA-F-220ENST00000434407 JDP2Q8WYK2 163 aa23.08■■□□□ 1.29
HLA-F-220ENST00000434407 MPHOSPH8Q99549 860 aa23.08■■□□□ 1.29
HLA-F-220ENST00000434407 MEIS3Q99687 375 aa23.08■■□□□ 1.29
HLA-F-220ENST00000434407 DPY19L2Q6NUT2 758 aa23.07■■□□□ 1.28
HLA-F-220ENST00000434407 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
HLA-F-220ENST00000434407 GGA1Q9UJY5 639 aa23.07■■□□□ 1.28
HLA-F-220ENST00000434407 HDAC5Q9UQL6 1122 aa23.07■■□□□ 1.28
HLA-F-220ENST00000434407 RLBP1P12271 317 aa23.06■■□□□ 1.28
HLA-F-220ENST00000434407 WASHC4Q2M389 1173 aa23.06■■□□□ 1.28
HLA-F-220ENST00000434407 DZIP1LQ8IYY4 767 aaKnown RBP23.06■■□□□ 1.28
HLA-F-220ENST00000434407 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
HLA-F-220ENST00000434407 ZNF541Q9H0D2 1346 aa23.06■■□□□ 1.28
HLA-F-220ENST00000434407 C6orf229H3BNL8 230 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 UFL1O94874 794 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 GNAI3P08754 354 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 ATP2B4P23634 1241 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 ZNF594Q96JF6 807 aaPredicted RBP23.05■■□□□ 1.28
HLA-F-220ENST00000434407 EYA3Q99504 573 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 NMRK2Q9NPI5 230 aa23.05■■□□□ 1.28
HLA-F-220ENST00000434407 KIF3CO14782 793 aa23.04■■□□□ 1.28
HLA-F-220ENST00000434407 YTHDC1Q96MU7 727 aaKnown RBP23.04■■□□□ 1.28
HLA-F-220ENST00000434407 ANKRD2Q9GZV1 360 aa23.04■■□□□ 1.28
HLA-F-220ENST00000434407 DDNO94850 711 aaPredicted RBP23.03■■□□□ 1.28
HLA-F-220ENST00000434407 CHRNDQ07001 517 aa23.03■■□□□ 1.28
HLA-F-220ENST00000434407 FTSJ3Q8IY81 847 aaKnown RBP23.03■■□□□ 1.28
HLA-F-220ENST00000434407 L3MBTL3Q96JM7 780 aaPredicted RBP23.03■■□□□ 1.28
HLA-F-220ENST00000434407 ZNRF3Q9ULT6 936 aa23.03■■□□□ 1.28
HLA-F-220ENST00000434407 LEMD3Q9Y2U8 911 aa23.03■■□□□ 1.28
HLA-F-220ENST00000434407 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
HLA-F-220ENST00000434407 POTECB2RU33 542 aa23.02■■□□□ 1.28
HLA-F-220ENST00000434407 RFX5P48382 616 aaPredicted RBP23.02■■□□□ 1.28
HLA-F-220ENST00000434407 TAF7LQ5H9L4 462 aa23.02■■□□□ 1.28
HLA-F-220ENST00000434407 LDHAL6AQ6ZMR3 332 aa23.02■■□□□ 1.28
HLA-F-220ENST00000434407 SCN4AP35499 1836 aa23.02■■□□□ 1.28
HLA-F-220ENST00000434407 SCN9AQ15858 1988 aa23.01■■□□□ 1.27
HLA-F-220ENST00000434407 WTIPA6NIX2 430 aaPredicted RBP23.01■■□□□ 1.27
HLA-F-220ENST00000434407 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
HLA-F-220ENST00000434407 GPC2Q8N158 579 aa23.01■■□□□ 1.27
HLA-F-220ENST00000434407 GPR101Q96P66 508 aaPredicted RBP23.01■■□□□ 1.27
HLA-F-220ENST00000434407 ZC3H12CQ9C0D7 883 aaKnown RBP23.01■■□□□ 1.27
HLA-F-220ENST00000434407 RIPOR2Q9Y4F9 1068 aa23.01■■□□□ 1.27
HLA-F-220ENST00000434407 YDJCA8MPS7 323 aa23■■□□□ 1.27
HLA-F-220ENST00000434407 PUS3Q9BZE2 481 aaKnown RBP23■■□□□ 1.27
HLA-F-220ENST00000434407 RRAGCQ9HB90 399 aa23■■□□□ 1.27
HLA-F-220ENST00000434407 MED23Q9ULK4 1368 aa23■■□□□ 1.27
HLA-F-220ENST00000434407 PSME4Q14997 1843 aa22.99■■□□□ 1.27
HLA-F-220ENST00000434407 RIMBP2O15034 1052 aa22.99■■□□□ 1.27
HLA-F-220ENST00000434407 MS4A1P11836 297 aa22.99■■□□□ 1.27
HLA-F-220ENST00000434407 CXCL9Q07325 125 aa22.99■■□□□ 1.27
HLA-F-220ENST00000434407 MTX1Q13505 466 aa22.99■■□□□ 1.27
HLA-F-220ENST00000434407 ZBTB7BO15156 539 aaPredicted RBP22.98■■□□□ 1.27
HLA-F-220ENST00000434407 VEGFAP15692 232 aaPredicted RBP22.98■■□□□ 1.27
HLA-F-220ENST00000434407 PTPN12Q05209 780 aaKnown RBP22.98■■□□□ 1.27
HLA-F-220ENST00000434407 CNNM1Q9NRU3 951 aa22.98■■□□□ 1.27
HLA-F-220ENST00000434407 ZNF804BA4D1E1 1349 aa22.98■■□□□ 1.27
HLA-F-220ENST00000434407 IRS2Q9Y4H2 1338 aa22.98■■□□□ 1.27
HLA-F-220ENST00000434407 GNAI2P04899 355 aa22.97■■□□□ 1.27
HLA-F-220ENST00000434407 C15orf52Q6ZUT6 534 aaKnown RBP22.97■■□□□ 1.27
HLA-F-220ENST00000434407 ITPRIPQ8IWB1 547 aa22.97■■□□□ 1.27
HLA-F-220ENST00000434407 HELBQ8NG08 1087 aaPredicted RBP22.97■■□□□ 1.27
HLA-F-220ENST00000434407 PANK1Q8TE04 598 aa22.97■■□□□ 1.27
HLA-F-220ENST00000434407 DBNDD1Q9H9R9 158 aa22.97■■□□□ 1.27
HLA-F-220ENST00000434407 ECE2O60344 883 aa22.96■■□□□ 1.27
HLA-F-220ENST00000434407 TAF5LO75529 589 aa22.96■■□□□ 1.27
HLA-F-220ENST00000434407 LRRC24Q50LG9 513 aa22.96■■□□□ 1.27
HLA-F-220ENST00000434407 KLHDC4Q8TBB5 520 aa22.96■■□□□ 1.27
HLA-F-220ENST00000434407 FBXO3Q9UK99 471 aa22.96■■□□□ 1.27
HLA-F-220ENST00000434407 PLIN1O60240 522 aa22.95■■□□□ 1.26
HLA-F-220ENST00000434407 DOK7Q18PE1 504 aa22.95■■□□□ 1.26
HLA-F-220ENST00000434407 CIAPIN1Q6FI81 312 aa22.95■■□□□ 1.26
HLA-F-220ENST00000434407 MROH5Q6ZUA9 1318 aa22.95■■□□□ 1.26
HLA-F-220ENST00000434407 TXNRD3Q86VQ6 643 aa22.95■■□□□ 1.26
HLA-F-220ENST00000434407 SNAP23O00161 211 aa22.94■■□□□ 1.26
HLA-F-220ENST00000434407 VGLL2Q8N8G2 317 aa22.94■■□□□ 1.26
HLA-F-220ENST00000434407 IQCA1LA6NCM1 817 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 EYA2O00167 538 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 RAD17O75943 681 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 KLRK1P26718 216 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 UBE4AQ14139 1066 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 PDE3AQ14432 1141 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 TNIP1Q15025 636 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 PODNQ7Z5L7 613 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 COPRSQ9NQ92 184 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 KCNQ5Q9NR82 932 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 GJA3Q9Y6H8 435 aa22.93■■□□□ 1.26
HLA-F-220ENST00000434407 ZNF646O15015 1829 aaPredicted RBP22.92■■□□□ 1.26
HLA-F-220ENST00000434407 CIAO1O76071 339 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms