RNA–Protein interactions for RNA: ENST00000433382.5

TRAPPC12-207, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-207ENST00000433382 LARGE2Q8N3Y3 721 aa15.7■□□□□ 0.1
TRAPPC12-207ENST00000433382 VPS33BQ9H267 617 aa15.7■□□□□ 0.1
TRAPPC12-207ENST00000433382 BSDC1Q9NW68 430 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-207ENST00000433382 VEGFAP15692 232 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC12-207ENST00000433382 SCNN1DP51172 638 aa15.69■□□□□ 0.1
TRAPPC12-207ENST00000433382 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC12-207ENST00000433382 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
TRAPPC12-207ENST00000433382 ANKRD18AQ8IVF6 992 aa15.69■□□□□ 0.1
TRAPPC12-207ENST00000433382 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC12-207ENST00000433382 SNAP23O00161 211 aa15.68■□□□□ 0.1
TRAPPC12-207ENST00000433382 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
TRAPPC12-207ENST00000433382 DPY19L2Q6NUT2 758 aa15.68■□□□□ 0.1
TRAPPC12-207ENST00000433382 TXNRD3Q86VQ6 643 aa15.68■□□□□ 0.1
TRAPPC12-207ENST00000433382 RBM46Q8TBY0 533 aaKnown RBP15.68■□□□□ 0.1
TRAPPC12-207ENST00000433382 ECM29Q5VYK3 1845 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 RIMBP2O15034 1052 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 KLRK1P26718 216 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 GPC2Q8N158 579 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 TAF1DQ9H5J8 278 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 DBNDD1Q9H9R9 158 aa15.67■□□□□ 0.1
TRAPPC12-207ENST00000433382 ARAP2Q8WZ64 1704 aa15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 NIM1KQ8IY84 436 aa15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 JDP2Q8WYK2 163 aa15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 BICC1Q9H694 974 aaKnown RBP15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 C9orf78Q9NZ63 289 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 ZNRF3Q9ULT6 936 aa15.66■□□□□ 0.1
TRAPPC12-207ENST00000433382 UFL1O94874 794 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 TRIM27P14373 513 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 EPS15P42566 896 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 RFX5P48382 616 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 DOK7Q18PE1 504 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 ARHGAP45Q92619 1136 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 PUS3Q9BZE2 481 aaKnown RBP15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 XDHP47989 1333 aa15.65■□□□□ 0.1
TRAPPC12-207ENST00000433382 C6orf229H3BNL8 230 aa15.64■□□□□ 0.09
TRAPPC12-207ENST00000433382 RAD17O75943 681 aa15.64■□□□□ 0.09
TRAPPC12-207ENST00000433382 CCT4P50991 539 aaKnown RBP15.64■□□□□ 0.09
TRAPPC12-207ENST00000433382 CHRNDQ07001 517 aa15.64■□□□□ 0.09
TRAPPC12-207ENST00000433382 INTS3Q68E01 1043 aaKnown RBP15.64■□□□□ 0.09
TRAPPC12-207ENST00000433382 GGA1Q9UJY5 639 aa15.64■□□□□ 0.09
TRAPPC12-207ENST00000433382 ANKRD18BA2A2Z9 1011 aa15.63■□□□□ 0.09
TRAPPC12-207ENST00000433382 ECE2O60344 883 aa15.63■□□□□ 0.09
TRAPPC12-207ENST00000433382 EIF6P56537 245 aaKnown RBP15.63■□□□□ 0.09
TRAPPC12-207ENST00000433382 MEIS3Q99687 375 aa15.63■□□□□ 0.09
TRAPPC12-207ENST00000433382 GJA3Q9Y6H8 435 aa15.63■□□□□ 0.09
TRAPPC12-207ENST00000433382 PCNTO95613 3336 aa15.63■□□□□ 0.09
TRAPPC12-207ENST00000433382 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 PSMD14O00487 310 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 TAF5LO75529 589 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 HSPA6P17066 643 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 ATP2B4P23634 1241 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 API5Q9BZZ5 524 aaKnown RBP15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 ANKIB1Q9P2G1 1089 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 MYO5AQ9Y4I1 1855 aaKnown RBP15.62■□□□□ 0.09
TRAPPC12-207ENST00000433382 ZNF609O15014 1411 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 RLBP1P12271 317 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 EPHX2P34913 555 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 GMPSP49915 693 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 HIRAP54198 1017 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 IFIT5Q13325 482 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 CIAPIN1Q6FI81 312 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 ATF7IPQ6VMQ6 1270 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 TMX4Q9H1E5 349 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 GPRC5DQ9NZD1 345 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 HACL1Q9UJ83 578 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
TRAPPC12-207ENST00000433382 ITGBL1O95965 494 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 EGFRP00533 1210 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 HTRA3P83110 453 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 FSTL1Q12841 308 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 VGLL2Q8N8G2 317 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 GMLQ99445 158 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 EYA3Q99504 573 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
TRAPPC12-207ENST00000433382 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-207ENST00000433382 MPHOSPH8Q99549 860 aa15.59■□□□□ 0.09
TRAPPC12-207ENST00000433382 ZC3H12CQ9C0D7 883 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-207ENST00000433382 LEMD3Q9Y2U8 911 aa15.59■□□□□ 0.09
TRAPPC12-207ENST00000433382 ZNF804BA4D1E1 1349 aa15.59■□□□□ 0.09
TRAPPC12-207ENST00000433382 PASKQ96RG2 1323 aa15.59■□□□□ 0.09
TRAPPC12-207ENST00000433382 IQCA1LA6NCM1 817 aa15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 FMR1Q06787 632 aaKnown RBP eCLIP15.58■□□□□ 0.082e-13■■■■■ 47.4
TRAPPC12-207ENST00000433382 C15orf52Q6ZUT6 534 aaKnown RBP15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 TMEM57Q8N5G2 664 aa15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 DNAJC5GQ8N7S2 189 aa15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 SMC1BQ8NDV3 1235 aa15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 TRPM4Q8TD43 1214 aa15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.08
TRAPPC12-207ENST00000433382 MXD3Q9BW11 206 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms