RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 BBOX1O75936 387 aa12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 SCNN1DP51172 638 aa12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 ANKRD13DQ6ZTN6 518 aa12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
CDC42-IT1-201ENST00000431803 DUOX1Q9NRD9 1551 aa12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 CALD1Q05682 793 aaKnown RBP12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 GRAPQ13588 217 aa12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 AOC3Q16853 763 aa12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 NIM1KQ8IY84 436 aa12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
CDC42-IT1-201ENST00000431803 CNTNAP1P78357 1384 aa12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 SNPHO15079 494 aa12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 GNAI1P63096 354 aa12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 COL13A1Q5TAT6 717 aaPredicted RBP12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 DDX46Q7L014 1031 aaKnown RBP12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
CDC42-IT1-201ENST00000431803 TMEM88BA6NKF7 163 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 DPP8Q6V1X1 898 aaPredicted RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ZNRF3Q9ULT6 936 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 TAF1P21675 1872 aa12.2□□□□□ -0.46
CDC42-IT1-201ENST00000431803 COL4A1P02462 1669 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 POTEMA6NI47 508 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 EPS15P42566 896 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CXCL9Q07325 125 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 MPNDQ8N594 471 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ZNF428Q96B54 188 aa12.19□□□□□ -0.46
CDC42-IT1-201ENST00000431803 PPP1R37O75864 691 aa12.18□□□□□ -0.46
CDC42-IT1-201ENST00000431803 USP50Q70EL3 339 aaPredicted RBP12.18□□□□□ -0.46
CDC42-IT1-201ENST00000431803 C8orf58Q8NAV2 365 aa12.18□□□□□ -0.46
CDC42-IT1-201ENST00000431803 PHAXQ9H814 394 aaKnown RBP12.18□□□□□ -0.46
CDC42-IT1-201ENST00000431803 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ELL2O00472 640 aaPredicted RBP12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 IRS4O14654 1257 aaPredicted RBP12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ST18O60284 1047 aa12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CCDC184Q52MB2 194 aa12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
CDC42-IT1-201ENST00000431803 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 YDJCA8MPS7 323 aa12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 VEGFBP49765 207 aa12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
CDC42-IT1-201ENST00000431803 TSPYL6Q8N831 410 aa12.15□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
CDC42-IT1-201ENST00000431803 CHMP4AQ9BY43 222 aa12.15□□□□□ -0.46
CDC42-IT1-201ENST00000431803 RAD17O75943 681 aa12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TNIP1Q15025 636 aa12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TSR2Q969E8 191 aaKnown RBP12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 MYD88Q99836 296 aa12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 THSD7BQ9C0I4 1608 aa12.14□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TRAF5O00463 557 aa12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 RPS8P62241 208 aaKnown RBP12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 GPSM2P81274 684 aa12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 CWC25Q9NXE8 425 aaPredicted RBP12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PGAP2Q9UHJ9 254 aa12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
CDC42-IT1-201ENST00000431803 IL16Q14005 1332 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 FOXN1O15353 648 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 DEFB115Q30KQ5 88 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 CST9Q5W186 159 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TNS4Q8IZW8 715 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TBC1D16Q8TBP0 767 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms