RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RASSF7Q02833 373 aa17.98■□□□□ 0.47
CSTF3-202ENST00000431742 PSMD1Q99460 953 aa17.98■□□□□ 0.47
CSTF3-202ENST00000431742 RTFDC1Q9BY42 306 aaPredicted RBP17.98■□□□□ 0.47
CSTF3-202ENST00000431742 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
CSTF3-202ENST00000431742 PRELPP51888 382 aa17.97■□□□□ 0.47
CSTF3-202ENST00000431742 FKBP4Q02790 459 aaKnown RBP eCLIP17.97■□□□□ 0.47
CSTF3-202ENST00000431742 PTPN12Q05209 780 aaKnown RBP17.97■□□□□ 0.47
CSTF3-202ENST00000431742 MPHOSPH8Q99549 860 aa17.97■□□□□ 0.47
CSTF3-202ENST00000431742 PODXL2Q9NZ53 605 aa17.97■□□□□ 0.47
CSTF3-202ENST00000431742 MINPP1Q9UNW1 487 aa17.97■□□□□ 0.47
CSTF3-202ENST00000431742 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
CSTF3-202ENST00000431742 COL4A5P29400 1685 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 PSME4Q14997 1843 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 PNMA6EA0A0J9YXQ4 647 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 GPSM2P81274 684 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 TAF7LQ5H9L4 462 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 MPNDQ8N594 471 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
CSTF3-202ENST00000431742 TMX4Q9H1E5 349 aaPredicted RBP17.96■□□□□ 0.47
CSTF3-202ENST00000431742 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
CSTF3-202ENST00000431742 POLA2Q14181 598 aa17.95■□□□□ 0.46
CSTF3-202ENST00000431742 CEP85Q6P2H3 762 aa17.95■□□□□ 0.46
CSTF3-202ENST00000431742 DPP8Q6V1X1 898 aaPredicted RBP17.95■□□□□ 0.46
CSTF3-202ENST00000431742 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
CSTF3-202ENST00000431742 SSH3Q8TE77 659 aa17.95■□□□□ 0.46
CSTF3-202ENST00000431742 PUS3Q9BZE2 481 aaKnown RBP17.95■□□□□ 0.46
CSTF3-202ENST00000431742 COPRSQ9NQ92 184 aa17.95■□□□□ 0.46
CSTF3-202ENST00000431742 XDHP47989 1333 aa17.95■□□□□ 0.46
CSTF3-202ENST00000431742 ZNF646O15015 1829 aaPredicted RBP17.94■□□□□ 0.46
CSTF3-202ENST00000431742 ATP8B2P98198 1209 aa17.94■□□□□ 0.46
CSTF3-202ENST00000431742 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
CSTF3-202ENST00000431742 NSFL1CQ9UNZ2 370 aaKnown RBP17.94■□□□□ 0.46
CSTF3-202ENST00000431742 RIPOR2Q9Y4F9 1068 aa17.94■□□□□ 0.46
CSTF3-202ENST00000431742 LMNB1P20700 586 aa17.93■□□□□ 0.46
CSTF3-202ENST00000431742 CHRNDQ07001 517 aa17.93■□□□□ 0.46
CSTF3-202ENST00000431742 LRRC24Q50LG9 513 aa17.93■□□□□ 0.46
CSTF3-202ENST00000431742 ANKRD2Q9GZV1 360 aa17.93■□□□□ 0.46
CSTF3-202ENST00000431742 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
CSTF3-202ENST00000431742 EYA2O00167 538 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 CIAO1O76071 339 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 ATG9AQ7Z3C6 839 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 SUPT20HQ8NEM7 779 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 TBC1D16Q8TBP0 767 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-202ENST00000431742 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-202ENST00000431742 ANKIB1Q9P2G1 1089 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
CSTF3-202ENST00000431742 PA2G4Q9UQ80 394 aaKnown RBP17.92■□□□□ 0.46
CSTF3-202ENST00000431742 SCN9AQ15858 1988 aa17.91■□□□□ 0.46
CSTF3-202ENST00000431742 IARSP41252 1262 aaKnown RBP17.91■□□□□ 0.46
CSTF3-202ENST00000431742 SIRT2Q8IXJ6 389 aa17.91■□□□□ 0.46
CSTF3-202ENST00000431742 RPAP2Q8IXW5 612 aaPredicted RBP17.91■□□□□ 0.46
CSTF3-202ENST00000431742 VGLL2Q8N8G2 317 aa17.91■□□□□ 0.46
CSTF3-202ENST00000431742 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
CSTF3-202ENST00000431742 GGA1Q9UJY5 639 aa17.91■□□□□ 0.46
CSTF3-202ENST00000431742 MROH5Q6ZUA9 1318 aa17.91■□□□□ 0.46
CSTF3-202ENST00000431742 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 UFL1O94874 794 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 ATP2B4P23634 1241 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 C9orf131Q5VYM1 1079 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 LEMD3Q9Y2U8 911 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 MED23Q9ULK4 1368 aa17.9■□□□□ 0.46
CSTF3-202ENST00000431742 WTIPA6NIX2 430 aaPredicted RBP17.89■□□□□ 0.45
CSTF3-202ENST00000431742 KIAA2012Q0VF49 1180 aa17.89■□□□□ 0.45
CSTF3-202ENST00000431742 HELBQ8NG08 1087 aaPredicted RBP17.89■□□□□ 0.45
CSTF3-202ENST00000431742 SIL1Q9H173 461 aa17.89■□□□□ 0.45
CSTF3-202ENST00000431742 RNF181Q9P0P0 153 aa17.89■□□□□ 0.45
CSTF3-202ENST00000431742 C6orf229H3BNL8 230 aa17.88■□□□□ 0.45
CSTF3-202ENST00000431742 TAF5LO75529 589 aa17.88■□□□□ 0.45
CSTF3-202ENST00000431742 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
CSTF3-202ENST00000431742 IL15P40933 162 aaPredicted RBP17.88■□□□□ 0.45
CSTF3-202ENST00000431742 AAMPQ13685 434 aa17.88■□□□□ 0.45
CSTF3-202ENST00000431742 GPR101Q96P66 508 aaPredicted RBP17.88■□□□□ 0.45
CSTF3-202ENST00000431742 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
CSTF3-202ENST00000431742 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
CSTF3-202ENST00000431742 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
CSTF3-202ENST00000431742 PPIP5K2O43314 1243 aa17.87■□□□□ 0.45
CSTF3-202ENST00000431742 PDE8BO95263 885 aa17.87■□□□□ 0.45
CSTF3-202ENST00000431742 AOC3Q16853 763 aa17.87■□□□□ 0.45
CSTF3-202ENST00000431742 METTL24Q5JXM2 366 aa17.87■□□□□ 0.45
CSTF3-202ENST00000431742 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
CSTF3-202ENST00000431742 EYA3Q99504 573 aa17.87■□□□□ 0.45
CSTF3-202ENST00000431742 SNAP23O00161 211 aa17.86■□□□□ 0.45
CSTF3-202ENST00000431742 HMMRO75330 724 aa17.86■□□□□ 0.45
CSTF3-202ENST00000431742 WASHC4Q2M389 1173 aa17.86■□□□□ 0.45
CSTF3-202ENST00000431742 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
CSTF3-202ENST00000431742 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
CSTF3-202ENST00000431742 KLRK1P26718 216 aa17.85■□□□□ 0.45
CSTF3-202ENST00000431742 UBE4AQ14139 1066 aa17.85■□□□□ 0.45
CSTF3-202ENST00000431742 LARGE2Q8N3Y3 721 aa17.85■□□□□ 0.45
CSTF3-202ENST00000431742 ZNF609O15014 1411 aa17.84■□□□□ 0.45
CSTF3-202ENST00000431742 FGFR2P21802 821 aa17.84■□□□□ 0.45
CSTF3-202ENST00000431742 KCNJ4P48050 445 aa17.84■□□□□ 0.45
CSTF3-202ENST00000431742 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
CSTF3-202ENST00000431742 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
CSTF3-202ENST00000431742 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
CSTF3-202ENST00000431742 FZD9O00144 591 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms