RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 CEP85Q6P2H3 762 aa18.85■□□□□ 0.61
CDRT15-202ENST00000431716 OLFM4Q6UX06 510 aa18.85■□□□□ 0.61
CDRT15-202ENST00000431716 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
CDRT15-202ENST00000431716 CACNA1SQ13698 1873 aa18.85■□□□□ 0.61
CDRT15-202ENST00000431716 ZC3H4Q9UPT8 1303 aaKnown RBP18.84■□□□□ 0.61
CDRT15-202ENST00000431716 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
CDRT15-202ENST00000431716 FKBP4Q02790 459 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDRT15-202ENST00000431716 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
CDRT15-202ENST00000431716 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
CDRT15-202ENST00000431716 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
CDRT15-202ENST00000431716 PNMA6EA0A0J9YXQ4 647 aa18.83■□□□□ 0.6
CDRT15-202ENST00000431716 HMMRO75330 724 aa18.83■□□□□ 0.6
CDRT15-202ENST00000431716 PTPN12Q05209 780 aaKnown RBP18.83■□□□□ 0.6
CDRT15-202ENST00000431716 POLA2Q14181 598 aa18.83■□□□□ 0.6
CDRT15-202ENST00000431716 DPY19L2Q6NUT2 758 aa18.83■□□□□ 0.6
CDRT15-202ENST00000431716 COPRSQ9NQ92 184 aa18.83■□□□□ 0.6
CDRT15-202ENST00000431716 CNNM1Q9NRU3 951 aa18.83■□□□□ 0.6
CDRT15-202ENST00000431716 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
CDRT15-202ENST00000431716 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
CDRT15-202ENST00000431716 MINPP1Q9UNW1 487 aa18.82■□□□□ 0.6
CDRT15-202ENST00000431716 EYA2O00167 538 aa18.81■□□□□ 0.6
CDRT15-202ENST00000431716 C16orf71Q8IYS4 520 aaPredicted RBP18.81■□□□□ 0.6
CDRT15-202ENST00000431716 MPNDQ8N594 471 aa18.81■□□□□ 0.6
CDRT15-202ENST00000431716 NMRK2Q9NPI5 230 aa18.81■□□□□ 0.6
CDRT15-202ENST00000431716 ZNF277Q9NRM2 450 aaPredicted RBP18.81■□□□□ 0.6
CDRT15-202ENST00000431716 COL4A1P02462 1669 aa18.81■□□□□ 0.6
CDRT15-202ENST00000431716 GLTPD2A6NH11 291 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 CIAO1O76071 339 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
CDRT15-202ENST00000431716 KLHDC4Q8TBB5 520 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 RRAGCQ9HB90 399 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 PODXL2Q9NZ53 605 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 NSFL1CQ9UNZ2 370 aaKnown RBP18.8■□□□□ 0.6
CDRT15-202ENST00000431716 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
CDRT15-202ENST00000431716 XDHP47989 1333 aa18.79■□□□□ 0.6
CDRT15-202ENST00000431716 MROH5Q6ZUA9 1318 aa18.79■□□□□ 0.6
CDRT15-202ENST00000431716 KIF3CO14782 793 aa18.79■□□□□ 0.6
CDRT15-202ENST00000431716 DPP8Q6V1X1 898 aaPredicted RBP18.79■□□□□ 0.6
CDRT15-202ENST00000431716 PSMD1Q99460 953 aa18.79■□□□□ 0.6
CDRT15-202ENST00000431716 PUS3Q9BZE2 481 aaKnown RBP18.79■□□□□ 0.6
CDRT15-202ENST00000431716 LRRC37AA6NMS7 1700 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 NEFLP07196 543 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 IL15P40933 162 aaPredicted RBP18.78■□□□□ 0.6
CDRT15-202ENST00000431716 IARSP41252 1262 aaKnown RBP18.78■□□□□ 0.6
CDRT15-202ENST00000431716 GPSM2P81274 684 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 CHRNDQ07001 517 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDRT15-202ENST00000431716 SIRT2Q8IXJ6 389 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 SUPT20HQ8NEM7 779 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 RTFDC1Q9BY42 306 aaPredicted RBP18.78■□□□□ 0.6
CDRT15-202ENST00000431716 PA2G4Q9UQ80 394 aaKnown RBP18.78■□□□□ 0.6
CDRT15-202ENST00000431716 SPEF2Q9C093 1822 aa18.78■□□□□ 0.6
CDRT15-202ENST00000431716 LRRC24Q50LG9 513 aa18.77■□□□□ 0.6
CDRT15-202ENST00000431716 JDP2Q8WYK2 163 aa18.77■□□□□ 0.6
CDRT15-202ENST00000431716 SIL1Q9H173 461 aa18.77■□□□□ 0.6
CDRT15-202ENST00000431716 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
CDRT15-202ENST00000431716 PCDHB15Q9Y5E8 787 aa18.77■□□□□ 0.6
CDRT15-202ENST00000431716 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
CDRT15-202ENST00000431716 CEP350Q5VT06 3117 aa18.77■□□□□ 0.6
CDRT15-202ENST00000431716 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
CDRT15-202ENST00000431716 TOMM70O94826 608 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 HSP90AB4PQ58FF6 505 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 METTL24Q5JXM2 366 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 ATG9AQ7Z3C6 839 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 VPS33BQ9H267 617 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 GGA1Q9UJY5 639 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
CDRT15-202ENST00000431716 C6orf229H3BNL8 230 aa18.75■□□□□ 0.59
CDRT15-202ENST00000431716 VEGFAP15692 232 aaPredicted RBP18.75■□□□□ 0.59
CDRT15-202ENST00000431716 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
CDRT15-202ENST00000431716 TBC1D16Q8TBP0 767 aa18.75■□□□□ 0.59
CDRT15-202ENST00000431716 CEP126Q9P2H0 1117 aa18.75■□□□□ 0.59
CDRT15-202ENST00000431716 UFL1O94874 794 aa18.74■□□□□ 0.59
CDRT15-202ENST00000431716 KCNJ4P48050 445 aa18.74■□□□□ 0.59
CDRT15-202ENST00000431716 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
CDRT15-202ENST00000431716 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
CDRT15-202ENST00000431716 HELBQ8NG08 1087 aaPredicted RBP18.74■□□□□ 0.59
CDRT15-202ENST00000431716 EYA3Q99504 573 aa18.74■□□□□ 0.59
CDRT15-202ENST00000431716 POLLQ9UGP5 575 aa18.74■□□□□ 0.59
CDRT15-202ENST00000431716 TAF5LO75529 589 aa18.73■□□□□ 0.59
CDRT15-202ENST00000431716 PDE8BO95263 885 aa18.73■□□□□ 0.59
CDRT15-202ENST00000431716 ERC1Q8IUD2 1116 aa18.73■□□□□ 0.59
CDRT15-202ENST00000431716 ZNF804BA4D1E1 1349 aa18.73■□□□□ 0.59
CDRT15-202ENST00000431716 PPIP5K2O43314 1243 aa18.72■□□□□ 0.59
CDRT15-202ENST00000431716 DDNO94850 711 aaPredicted RBP18.72■□□□□ 0.59
CDRT15-202ENST00000431716 HDAC1Q13547 482 aaPredicted RBP18.72■□□□□ 0.59
CDRT15-202ENST00000431716 UBE4AQ14139 1066 aa18.72■□□□□ 0.59
CDRT15-202ENST00000431716 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
CDRT15-202ENST00000431716 VGLL2Q8N8G2 317 aa18.72■□□□□ 0.59
CDRT15-202ENST00000431716 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
CDRT15-202ENST00000431716 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
CDRT15-202ENST00000431716 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
CDRT15-202ENST00000431716 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
CDRT15-202ENST00000431716 ZC3H12CQ9C0D7 883 aaKnown RBP18.71■□□□□ 0.59
CDRT15-202ENST00000431716 RWDD1Q9H446 243 aaPredicted RBP18.71■□□□□ 0.59
CDRT15-202ENST00000431716 KIAA2012Q0VF49 1180 aa18.7■□□□□ 0.58
CDRT15-202ENST00000431716 PUM3Q15397 648 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms