RNA–Protein interactions for RNA: ENST00000430789.1

AFF3-209, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-209ENST00000430789 RIMBP2O15034 1052 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 ANXA1P04083 346 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 FXR1P51114 621 aaKnown RBP eCLIP7.78□□□□□ -1.16
AFF3-209ENST00000430789 CNGB1Q14028 1251 aaPredicted RBP7.78□□□□□ -1.16
AFF3-209ENST00000430789 SCARF1Q14162 830 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 ANGEL2Q5VTE6 544 aaKnown RBP7.78□□□□□ -1.16
AFF3-209ENST00000430789 TBC1D16Q8TBP0 767 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 TRMT112Q9UI30 125 aaKnown RBP7.78□□□□□ -1.16
AFF3-209ENST00000430789 HDAC9Q9UKV0 1011 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 NSFL1CQ9UNZ2 370 aaKnown RBP7.78□□□□□ -1.16
AFF3-209ENST00000430789 KDM3BQ7LBC6 1761 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 MKI67P46013 3256 aaKnown RBP7.78□□□□□ -1.16
AFF3-209ENST00000430789 LRRC37AA6NMS7 1700 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
AFF3-209ENST00000430789 ANKRD36CQ5JPF3 1778 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 COL4A1P02462 1669 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 UBE2Q2LH0YL09 131 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 C6orf229H3BNL8 230 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 HSP90AB3PQ58FF7 597 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 COPS6Q7L5N1 327 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 NECTIN2Q92692 538 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 PODXL2Q9NZ53 605 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 AKAP11Q9UKA4 1901 aa7.77□□□□□ -1.17
AFF3-209ENST00000430789 LAMB2P55268 1798 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 HTTP42858 3142 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 POTEFA5A3E0 1075 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 FKTNO75072 461 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 RSBN1LQ6PCB5 846 aaPredicted RBP7.76□□□□□ -1.17
AFF3-209ENST00000430789 AGBL3Q8NEM8 1001 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 XAGE3Q8WTP9 111 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 EYA3Q99504 573 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 ISCA1Q9BUE6 129 aa7.76□□□□□ -1.17
AFF3-209ENST00000430789 TAF1P21675 1872 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 PAPPA2Q9BXP8 1791 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
AFF3-209ENST00000430789 RPS8P62241 208 aaKnown RBP7.75□□□□□ -1.17
AFF3-209ENST00000430789 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 PRAMEF18Q5VWM3 479 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 FAM89AQ96GI7 184 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 ZC3H12CQ9C0D7 883 aaKnown RBP7.75□□□□□ -1.17
AFF3-209ENST00000430789 MYOZ2Q9NPC6 264 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 SCAF8Q9UPN6 1271 aaKnown RBP7.75□□□□□ -1.17
AFF3-209ENST00000430789 SCN9AQ15858 1988 aa7.75□□□□□ -1.17
AFF3-209ENST00000430789 USP17L8P0C7I0 530 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
AFF3-209ENST00000430789 AIMP1Q12904 312 aaKnown RBP7.74□□□□□ -1.17
AFF3-209ENST00000430789 TRIM28Q13263 835 aaKnown RBP7.74□□□□□ -1.17
AFF3-209ENST00000430789 NBPF9Q3BBW0 867 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 INTS3Q68E01 1043 aaKnown RBP7.74□□□□□ -1.17
AFF3-209ENST00000430789 OTOP1Q7RTM1 612 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 ZNF428Q96B54 188 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 ARMC5Q96C12 935 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 PCGF6Q9BYE7 350 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 BABAM1Q9NWV8 329 aa7.74□□□□□ -1.17
AFF3-209ENST00000430789 CAP1Q01518 475 aa7.73□□□□□ -1.17
AFF3-209ENST00000430789 SPRYD7Q5W111 196 aa7.73□□□□□ -1.17
AFF3-209ENST00000430789 TSPYL4Q9UJ04 414 aa7.73□□□□□ -1.17
AFF3-209ENST00000430789 WTIPA6NIX2 430 aaPredicted RBP7.72□□□□□ -1.17
AFF3-209ENST00000430789 WNT10BO00744 389 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 UFL1O94874 794 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 EN2P19622 333 aaPredicted RBP7.72□□□□□ -1.17
AFF3-209ENST00000430789 SREBF2Q12772 1141 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
AFF3-209ENST00000430789 ANKRD13DQ6ZTN6 518 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 PODNQ7Z5L7 613 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 PLBD2Q8NHP8 589 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 SEC31BQ9NQW1 1179 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 GGA1Q9UJY5 639 aa7.72□□□□□ -1.17
AFF3-209ENST00000430789 COLQQ9Y215 455 aaPredicted RBP7.72□□□□□ -1.17
AFF3-209ENST00000430789 DDX60Q8IY21 1712 aaKnown RBP7.72□□□□□ -1.17
AFF3-209ENST00000430789 KIAA0100Q14667 2235 aaKnown RBP7.71□□□□□ -1.17
AFF3-209ENST00000430789 USP17L3A6NCW0 530 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 USP17L4A6NCW7 530 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 IRS4O14654 1257 aaPredicted RBP7.71□□□□□ -1.18
AFF3-209ENST00000430789 ALDH1A1P00352 501 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 INHBEP58166 350 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 KRT24Q2M2I5 525 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 DACT2Q5SW24 774 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 USP17L1Q7RTZ2 530 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 IFNL1Q8IU54 200 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 OTUD5Q96G74 571 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 ZBED3Q96IU2 234 aaPredicted RBP7.71□□□□□ -1.18
AFF3-209ENST00000430789 CHPF2Q9P2E5 772 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 PTPN22Q9Y2R2 807 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
AFF3-209ENST00000430789 DLG5Q8TDM6 1919 aa7.7□□□□□ -1.18
AFF3-209ENST00000430789 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
AFF3-209ENST00000430789 CHL1O00533 1208 aa7.7□□□□□ -1.18
AFF3-209ENST00000430789 MAP3K11Q16584 847 aa7.7□□□□□ -1.18
AFF3-209ENST00000430789 RTL5Q5HYW3 569 aaPredicted RBP7.7□□□□□ -1.18
AFF3-209ENST00000430789 MXD3Q9BW11 206 aa7.7□□□□□ -1.18
AFF3-209ENST00000430789 ANKIB1Q9P2G1 1089 aa7.7□□□□□ -1.18
AFF3-209ENST00000430789 SZT2Q5T011 3432 aa7.69□□□□□ -1.18
AFF3-209ENST00000430789 MANSC4A6NHS7 340 aaPredicted RBP7.69□□□□□ -1.18
AFF3-209ENST00000430789 NEFMP07197 916 aa7.69□□□□□ -1.18
AFF3-209ENST00000430789 MMP14P50281 582 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms