RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 LDHAL6AQ6ZMR3 332 aa11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 TBC1D16Q8TBP0 767 aa11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 ZNF594Q96JF6 807 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
SMARCAL1-207ENST00000430374 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 IARSP41252 1262 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 CHRNDQ07001 517 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 ANKRD2Q9GZV1 360 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 ANKIB1Q9P2G1 1089 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
SMARCAL1-207ENST00000430374 LTBP1Q14766 1721 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 CIAO1O76071 339 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 UFL1O94874 794 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 ATP2B4P23634 1241 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 KIAA2012Q0VF49 1180 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 KLHDC4Q8TBB5 520 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 CNNM1Q9NRU3 951 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 LEMD3Q9Y2U8 911 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 FER1L6Q2WGJ9 1857 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 MROH5Q6ZUA9 1318 aa11.84□□□□□ -0.51
SMARCAL1-207ENST00000430374 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 EYA2O00167 538 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 POLA2Q14181 598 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 CEP85Q6P2H3 762 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 EYA3Q99504 573 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 MYH3P11055 1940 aa11.83□□□□□ -0.52
SMARCAL1-207ENST00000430374 C6orf229H3BNL8 230 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 FZD9O00144 591 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 YY1P25490 414 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 AOC3Q16853 763 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 LARGE2Q8N3Y3 721 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 VGLL2Q8N8G2 317 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 ZNF804BA4D1E1 1349 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 IRS2Q9Y4H2 1338 aa11.82□□□□□ -0.52
SMARCAL1-207ENST00000430374 COL4A5P29400 1685 aa11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 MED23Q9ULK4 1368 aa11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 WTIPA6NIX2 430 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 PDE8BO95263 885 aa11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 RPAP2Q8IXW5 612 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 JDP2Q8WYK2 163 aa11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-207ENST00000430374 TAF1P21675 1872 aa11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 TAF5LO75529 589 aa11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 UBE4AQ14139 1066 aa11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 METTL24Q5JXM2 366 aa11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 ZNRF3Q9ULT6 936 aa11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 CACNA1SQ13698 1873 aa11.8□□□□□ -0.52
SMARCAL1-207ENST00000430374 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
SMARCAL1-207ENST00000430374 SNAP23O00161 211 aa11.79□□□□□ -0.52
SMARCAL1-207ENST00000430374 KLRK1P26718 216 aa11.79□□□□□ -0.52
SMARCAL1-207ENST00000430374 KCNJ4P48050 445 aa11.79□□□□□ -0.52
SMARCAL1-207ENST00000430374 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
SMARCAL1-207ENST00000430374 SIL1Q9H173 461 aa11.79□□□□□ -0.52
SMARCAL1-207ENST00000430374 YDJCA8MPS7 323 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 FGFR2P21802 821 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 AAMPQ13685 434 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 TXNRD3Q86VQ6 643 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 COA1Q9GZY4 146 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
SMARCAL1-207ENST00000430374 ECE2O60344 883 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 HMMRO75330 724 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 EIF6P56537 245 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 PODNQ7Z5L7 613 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 GPC2Q8N158 579 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 KDM2BQ8NHM5 1336 aa11.77□□□□□ -0.53
SMARCAL1-207ENST00000430374 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-207ENST00000430374 SASH1O94885 1247 aa11.76□□□□□ -0.53
SMARCAL1-207ENST00000430374 CXCL9Q07325 125 aa11.76□□□□□ -0.53
SMARCAL1-207ENST00000430374 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMARCAL1-207ENST00000430374 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms