RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ECE2O60344 883 aa15.16■□□□□ 0.02
HDAC4-202ENST00000430200 PDE8AO60658 829 aa15.16■□□□□ 0.02
HDAC4-202ENST00000430200 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
HDAC4-202ENST00000430200 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
HDAC4-202ENST00000430200 USP50Q70EL3 339 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-202ENST00000430200 GREM2Q9H772 168 aa15.16■□□□□ 0.02
HDAC4-202ENST00000430200 ADARB2Q9NS39 739 aaKnown RBP15.16■□□□□ 0.02
HDAC4-202ENST00000430200 ZNF609O15014 1411 aa15.16■□□□□ 0.02
HDAC4-202ENST00000430200 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
HDAC4-202ENST00000430200 RASSF10A6NK89 507 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 C6orf229H3BNL8 230 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 VAMP4O75379 141 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 UFL1O94874 794 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
HDAC4-202ENST00000430200 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 CST9Q5W186 159 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 UBE3BQ7Z3V4 1068 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-202ENST00000430200 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-202ENST00000430200 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
HDAC4-202ENST00000430200 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
HDAC4-202ENST00000430200 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
HDAC4-202ENST00000430200 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
HDAC4-202ENST00000430200 TTLL11Q8NHH1 800 aa15.14■□□□□ 0.01
HDAC4-202ENST00000430200 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-202ENST00000430200 F6X3S4 739 aa15.13■□□□□ 0.01
HDAC4-202ENST00000430200 H7C1W4 665 aa15.13■□□□□ 0.01
HDAC4-202ENST00000430200 FOXN1O15353 648 aa15.13■□□□□ 0.01
HDAC4-202ENST00000430200 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
HDAC4-202ENST00000430200 SAMD7Q7Z3H4 446 aa15.13■□□□□ 0.01
HDAC4-202ENST00000430200 WDR63Q8IWG1 891 aa15.13■□□□□ 0.01
HDAC4-202ENST00000430200 KLRK1P26718 216 aa15.12■□□□□ 0.01
HDAC4-202ENST00000430200 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-202ENST00000430200 GCKRQ14397 625 aa15.12■□□□□ 0.01
HDAC4-202ENST00000430200 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
HDAC4-202ENST00000430200 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
HDAC4-202ENST00000430200 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
HDAC4-202ENST00000430200 TNIP1Q15025 636 aa15.11■□□□□ 0.01
HDAC4-202ENST00000430200 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-202ENST00000430200 DNAAF4Q8WXU2 420 aa15.11■□□□□ 0.01
HDAC4-202ENST00000430200 XDHP47989 1333 aa15.11■□□□□ 0.01
HDAC4-202ENST00000430200 TXNRD3Q86VQ6 643 aa15.1■□□□□ 0.01
HDAC4-202ENST00000430200 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
HDAC4-202ENST00000430200 ANKIB1Q9P2G1 1089 aa15.1■□□□□ 0.01
HDAC4-202ENST00000430200 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
HDAC4-202ENST00000430200 ABT1Q9ULW3 272 aaKnown RBP15.1■□□□□ 0.01
HDAC4-202ENST00000430200 MED23Q9ULK4 1368 aa15.1■□□□□ 0.01
HDAC4-202ENST00000430200 NEXNQ0ZGT2 675 aa15.09■□□□□ 0.01
HDAC4-202ENST00000430200 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
HDAC4-202ENST00000430200 EYA3Q99504 573 aa15.09■□□□□ 0.01
HDAC4-202ENST00000430200 PLA2G12BQ9BX93 195 aa15.09■□□□□ 0.01
HDAC4-202ENST00000430200 MINPP1Q9UNW1 487 aa15.09■□□□□ 0.01
HDAC4-202ENST00000430200 MYH13Q9UKX3 1938 aa15.09■□□□□ 0.01
HDAC4-202ENST00000430200 ADM5C9JUS6 153 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 BEND3Q5T5X7 828 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 LINS1Q8NG48 757 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 DPF2Q92785 391 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 MXD3Q9BW11 206 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 TLL2Q9Y6L7 1015 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
HDAC4-202ENST00000430200 IRS2Q9Y4H2 1338 aa15.08■□□□□ 0
HDAC4-202ENST00000430200 LAMB1P07942 1786 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 PAPPA2Q9BXP8 1791 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 SNAP23O00161 211 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 CELF2O95319 508 aaKnown RBP15.07■□□□□ 0
HDAC4-202ENST00000430200 VIL1P09327 827 aaKnown RBP15.07■□□□□ 0
HDAC4-202ENST00000430200 ITGA6P23229 1130 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 FOXO4P98177 505 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 DEFB115Q30KQ5 88 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 GMLQ99445 158 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 WBP1LQ9NX94 342 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 OTOFQ9HC10 1997 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
HDAC4-202ENST00000430200 AOC2O75106 756 aa15.06■□□□□ 0
HDAC4-202ENST00000430200 CSF1RP07333 972 aa15.06■□□□□ 0
HDAC4-202ENST00000430200 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
HDAC4-202ENST00000430200 SAPCD2Q86UD0 394 aa15.06■□□□□ 0
HDAC4-202ENST00000430200 CAPNS2Q96L46 248 aa15.06■□□□□ 0
HDAC4-202ENST00000430200 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
HDAC4-202ENST00000430200 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
HDAC4-202ENST00000430200 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
HDAC4-202ENST00000430200 BSDC1Q9NW68 430 aaPredicted RBP15.06■□□□□ 0
HDAC4-202ENST00000430200 AKAP11Q9UKA4 1901 aa15.05■□□□□ 0
HDAC4-202ENST00000430200 RPS12P25398 132 aaKnown RBP15.05■□□□□ -0
HDAC4-202ENST00000430200 CCT4P50991 539 aaKnown RBP15.05■□□□□ -0
HDAC4-202ENST00000430200 GRM1Q13255 1194 aa15.05■□□□□ -0
HDAC4-202ENST00000430200 KIF4BQ2VIQ3 1234 aa15.05■□□□□ -0
HDAC4-202ENST00000430200 RBM26Q5T8P6 1007 aaKnown RBP15.05■□□□□ -0
HDAC4-202ENST00000430200 RSBN1LQ6PCB5 846 aaPredicted RBP15.05■□□□□ -0
HDAC4-202ENST00000430200 USP48Q86UV5 1035 aa15.05■□□□□ -0
HDAC4-202ENST00000430200 ZC3H15Q8WU90 426 aaKnown RBP15.05■□□□□ -0
HDAC4-202ENST00000430200 CHMP4AQ9BY43 222 aa15.05■□□□□ -0
HDAC4-202ENST00000430200 GGA3Q9NZ52 723 aa15.05■□□□□ -0
HDAC4-202ENST00000430200 SCAF8Q9UPN6 1271 aaKnown RBP15.05■□□□□ -0
HDAC4-202ENST00000430200 H7C1D1 291 aa15.04■□□□□ -0
HDAC4-202ENST00000430200 HSPA8P11142 646 aaKnown RBP15.04■□□□□ -0
HDAC4-202ENST00000430200 ATP2B4P23634 1241 aa15.04■□□□□ -0
HDAC4-202ENST00000430200 ZNF280AP59817 542 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 276.2 ms