RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ACBD3Q9H3P7 528 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 SENP3Q9H4L4 574 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 SPATA31D1Q6ZQQ2 1576 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 ANKRD65E5RJM6 399 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCP110O43303 1012 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 EVCP57679 992 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 MKL1Q969V6 931 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 PPP1R13BQ96KQ4 1090 aa10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 TMX4Q9H1E5 349 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-206ENST00000429440 ARHGEF40Q8TER5 1519 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 RPS6KA3P51812 740 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 CCNHP51946 323 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 RBM43Q6ZSC3 357 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 ANKRD18AQ8IVF6 992 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 BICD2Q8TD16 824 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 ANAPC4Q9UJX5 808 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 ODF2LQ9ULJ1 636 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 A2ML1A8K2U0 1454 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 MED14O60244 1454 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 PRPHP41219 470 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 LIG3P49916 1009 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 FOXD4L6Q3SYB3 417 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 ANO6Q4KMQ2 910 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 FBXW10Q5XX13 1052 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 FOXD4L3Q6VB84 417 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 FAM71BQ8TC56 605 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 ZKSCAN4Q969J2 545 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 IL17RAQ96F46 866 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 NUP62CLQ9H1M0 184 aa10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 SUDS3Q9H7L9 328 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-206ENST00000429440 ERC2O15083 957 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 SNUPNO95149 360 aaKnown RBP10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 CCT2P78371 535 aaKnown RBP10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 E4F1Q66K89 784 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 HDXQ7Z353 690 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 DRAXINQ8NBI3 349 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 RGS12O14924 1447 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 NRXN3Q9Y4C0 1643 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 MAGEA8P43361 318 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 RSRC2Q7L4I2 434 aaKnown RBP10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 AMOTL1Q8IY63 956 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 PRAM1Q96QH2 718 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 PDE11AQ9HCR9 933 aa10.26□□□□□ -0.77
CDC42BPA-206ENST00000429440 MSH6P52701 1360 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 ATXN2Q99700 1313 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 KIF13AQ9H1H9 1805 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 PPFIA2O75334 1257 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 ZNF165P49910 485 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 ARID5BQ14865 1188 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 OSBPL5Q9H0X9 879 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 IMPACTQ9P2X3 320 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 RRP7AQ9Y3A4 280 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 TTC21BQ7Z4L5 1316 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 NRDCO43847 1150 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 SETSIPP0DME0 302 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 PECAM1P16284 738 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 ISM2Q6H9L7 571 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 IQCA1Q86XH1 822 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 SSH1Q8WYL5 1049 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 CARD6Q9BX69 1037 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 PARD6BQ9BYG5 372 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 NOB1Q9ULX3 412 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 FAN1Q9Y2M0 1017 aa10.25□□□□□ -0.77
CDC42BPA-206ENST00000429440 F13A1P00488 732 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 TBC1D25Q3MII6 688 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 VPS53Q5VIR6 699 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 MICAL1Q8TDZ2 1067 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 FAM169AQ9Y6X4 670 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 EBAG9O00559 213 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 FIBPO43427 364 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 INPP5BP32019 993 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 USP5P45974 858 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 TRIM74Q86UV6 250 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 TRIM73Q86UV7 250 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 TCP11Q8WWU5 503 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 THOC1Q96FV9 657 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 HOMER3Q9NSC5 361 aa10.24□□□□□ -0.77
CDC42BPA-206ENST00000429440 DLC1Q96QB1 1528 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 KIF20BQ96Q89 1820 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 FYB1O15117 783 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 SLC8A3P57103 927 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 HSP90B2PQ58FF3 399 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 RCSD1Q6JBY9 416 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 DDX19AQ9NUU7 478 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 GOLGA6L19H0YKK7 550 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 STX6O43752 255 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 TXLNAP40222 546 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 BEND6Q5SZJ8 279 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 RPUSD2Q8IZ73 545 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 CCDC150Q8NCX0 1101 aa10.23□□□□□ -0.77
CDC42BPA-206ENST00000429440 MPHOSPH8Q99549 860 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms