RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DNAJC10Q8IXB1 793 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 PPP1R9BQ96SB3 815 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 USP21Q9UK80 565 aa16.3■□□□□ 0.2
THBS3-202ENST00000428962 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
THBS3-202ENST00000428962 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
THBS3-202ENST00000428962 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
THBS3-202ENST00000428962 SYCE3A1L190 88 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
THBS3-202ENST00000428962 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
THBS3-202ENST00000428962 NEK1Q96PY6 1258 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
THBS3-202ENST00000428962 BCL9O00512 1426 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 GOLIM4O00461 696 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
THBS3-202ENST00000428962 IFIT1P09914 478 aaKnown RBP16.29■□□□□ 0.2
THBS3-202ENST00000428962 UBE2HP62256 183 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 ST3GAL1Q11201 340 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
THBS3-202ENST00000428962 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
THBS3-202ENST00000428962 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
THBS3-202ENST00000428962 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
THBS3-202ENST00000428962 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
THBS3-202ENST00000428962 TAF7LQ5H9L4 462 aa16.28■□□□□ 0.2
THBS3-202ENST00000428962 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
THBS3-202ENST00000428962 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
THBS3-202ENST00000428962 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
THBS3-202ENST00000428962 CNPY2Q9Y2B0 182 aa16.28■□□□□ 0.2
THBS3-202ENST00000428962 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 ABCC12Q96J65 1359 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 LETM1O95202 739 aaPredicted RBP16.27■□□□□ 0.2
THBS3-202ENST00000428962 TIMM10P62072 90 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
THBS3-202ENST00000428962 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 ZNF594Q96JF6 807 aaPredicted RBP16.27■□□□□ 0.2
THBS3-202ENST00000428962 RBSNQ9H1K0 784 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
THBS3-202ENST00000428962 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
THBS3-202ENST00000428962 VPS37CA5D8V6 355 aaPredicted RBP16.26■□□□□ 0.19
THBS3-202ENST00000428962 IFIT5Q13325 482 aaKnown RBP16.26■□□□□ 0.19
THBS3-202ENST00000428962 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
THBS3-202ENST00000428962 LARP1BQ659C4 914 aaKnown RBP16.26■□□□□ 0.19
THBS3-202ENST00000428962 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
THBS3-202ENST00000428962 TSPY26PQ9H489 355 aa16.26■□□□□ 0.19
THBS3-202ENST00000428962 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
THBS3-202ENST00000428962 CSF1RP07333 972 aa16.26■□□□□ 0.19
THBS3-202ENST00000428962 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
THBS3-202ENST00000428962 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
THBS3-202ENST00000428962 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
THBS3-202ENST00000428962 ESPNB1AK53 854 aa16.25■□□□□ 0.19
THBS3-202ENST00000428962 EXOC5O00471 708 aa16.25■□□□□ 0.19
THBS3-202ENST00000428962 RNF113AO15541 343 aaKnown RBP16.25■□□□□ 0.19
THBS3-202ENST00000428962 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
THBS3-202ENST00000428962 CYP21A2P08686 494 aa16.25■□□□□ 0.19
THBS3-202ENST00000428962 CLCN1P35523 988 aa16.25■□□□□ 0.19
THBS3-202ENST00000428962 TTC39AQ5SRH9 613 aa16.25■□□□□ 0.19
THBS3-202ENST00000428962 SEC62Q99442 399 aaKnown RBP16.25■□□□□ 0.19
THBS3-202ENST00000428962 PUS3Q9BZE2 481 aaKnown RBP16.25■□□□□ 0.19
THBS3-202ENST00000428962 TAF6LQ9Y6J9 622 aa16.25■□□□□ 0.19
THBS3-202ENST00000428962 FIBPO43427 364 aa16.24■□□□□ 0.19
THBS3-202ENST00000428962 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
THBS3-202ENST00000428962 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
THBS3-202ENST00000428962 TCHHQ07283 1943 aa16.24■□□□□ 0.19
THBS3-202ENST00000428962 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
THBS3-202ENST00000428962 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
THBS3-202ENST00000428962 FAM89AQ96GI7 184 aa16.24■□□□□ 0.19
THBS3-202ENST00000428962 CDCA7Q9BWT1 371 aaPredicted RBP16.24■□□□□ 0.19
THBS3-202ENST00000428962 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
THBS3-202ENST00000428962 KRT85P78386 507 aa16.23■□□□□ 0.19
THBS3-202ENST00000428962 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
THBS3-202ENST00000428962 MAST3O60307 1309 aa16.23■□□□□ 0.19
THBS3-202ENST00000428962 BCL9LQ86UU0 1499 aa16.23■□□□□ 0.19
THBS3-202ENST00000428962 FGD1P98174 961 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
THBS3-202ENST00000428962 HS1BP3Q53T59 392 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 Q6ZUG5 572 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 FAM184AQ8NB25 1140 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 MYH3P11055 1940 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 CTSWP56202 376 aa16.22■□□□□ 0.19
THBS3-202ENST00000428962 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
THBS3-202ENST00000428962 ATRNO75882 1429 aa16.21■□□□□ 0.19
THBS3-202ENST00000428962 RIC1Q4ADV7 1423 aa16.21■□□□□ 0.19
THBS3-202ENST00000428962 SLIT2O94813 1529 aa16.21■□□□□ 0.19
THBS3-202ENST00000428962 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
THBS3-202ENST00000428962 CHGBP05060 677 aa16.21■□□□□ 0.19
THBS3-202ENST00000428962 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
THBS3-202ENST00000428962 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
THBS3-202ENST00000428962 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
THBS3-202ENST00000428962 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms