RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 MTX1Q13505 466 aa27.88■■■□□ 2.05
PTPN18-205ENST00000428843 LDHAL6AQ6ZMR3 332 aa27.88■■■□□ 2.05
PTPN18-205ENST00000428843 KLHDC4Q8TBB5 520 aa27.88■■■□□ 2.05
PTPN18-205ENST00000428843 NSFL1CQ9UNZ2 370 aaKnown RBP27.88■■■□□ 2.05
PTPN18-205ENST00000428843 DUOX1Q9NRD9 1551 aa27.87■■■□□ 2.05
PTPN18-205ENST00000428843 CHMP4BQ9H444 224 aaKnown RBP27.87■■■□□ 2.05
PTPN18-205ENST00000428843 ZNF277Q9NRM2 450 aaPredicted RBP27.87■■■□□ 2.05
PTPN18-205ENST00000428843 ZBTB40Q9NUA8 1239 aa27.87■■■□□ 2.05
PTPN18-205ENST00000428843 LMNB1P20700 586 aa27.86■■■□□ 2.05
PTPN18-205ENST00000428843 RTFDC1Q9BY42 306 aaPredicted RBP27.86■■■□□ 2.05
PTPN18-205ENST00000428843 PUS3Q9BZE2 481 aaKnown RBP27.86■■■□□ 2.05
PTPN18-205ENST00000428843 CNNM1Q9NRU3 951 aa27.86■■■□□ 2.05
PTPN18-205ENST00000428843 ANKIB1Q9P2G1 1089 aa27.86■■■□□ 2.05
PTPN18-205ENST00000428843 A0A1B0GUL6 1792 aa27.86■■■□□ 2.05
PTPN18-205ENST00000428843 SRGAP3O43295 1099 aa27.85■■■□□ 2.05
PTPN18-205ENST00000428843 PTPN12Q05209 780 aaKnown RBP27.85■■■□□ 2.05
PTPN18-205ENST00000428843 C9orf131Q5VYM1 1079 aa27.85■■■□□ 2.05
PTPN18-205ENST00000428843 PODXL2Q9NZ53 605 aa27.85■■■□□ 2.05
PTPN18-205ENST00000428843 RNF181Q9P0P0 153 aa27.85■■■□□ 2.05
PTPN18-205ENST00000428843 DICER1Q9UPY3 1922 aaKnown RBP27.84■■■□□ 2.05
PTPN18-205ENST00000428843 PNMA6EA0A0J9YXQ4 647 aa27.84■■■□□ 2.05
PTPN18-205ENST00000428843 SUPT20HQ8NEM7 779 aa27.84■■■□□ 2.05
PTPN18-205ENST00000428843 XDHP47989 1333 aa27.84■■■□□ 2.05
PTPN18-205ENST00000428843 ATP8B2P98198 1209 aa27.83■■■□□ 2.05
PTPN18-205ENST00000428843 CHRNDQ07001 517 aa27.83■■■□□ 2.05
PTPN18-205ENST00000428843 POLLQ9UGP5 575 aa27.83■■■□□ 2.05
PTPN18-205ENST00000428843 IARSP41252 1262 aaKnown RBP27.82■■■□□ 2.04
PTPN18-205ENST00000428843 LRRC24Q50LG9 513 aa27.82■■■□□ 2.04
PTPN18-205ENST00000428843 TBC1D16Q8TBP0 767 aa27.82■■■□□ 2.04
PTPN18-205ENST00000428843 CRBNQ96SW2 442 aa27.82■■■□□ 2.04
PTPN18-205ENST00000428843 ANKRD2Q9GZV1 360 aa27.82■■■□□ 2.04
PTPN18-205ENST00000428843 GGA1Q9UJY5 639 aa27.82■■■□□ 2.04
PTPN18-205ENST00000428843 RIPOR2Q9Y4F9 1068 aa27.82■■■□□ 2.04
PTPN18-205ENST00000428843 C6orf229H3BNL8 230 aa27.81■■■□□ 2.04
PTPN18-205ENST00000428843 UFL1O94874 794 aa27.81■■■□□ 2.04
PTPN18-205ENST00000428843 CEP85Q6P2H3 762 aa27.81■■■□□ 2.04
PTPN18-205ENST00000428843 PA2G4Q9UQ80 394 aaKnown RBP27.81■■■□□ 2.04
PTPN18-205ENST00000428843 ATP2B4P23634 1241 aa27.8■■■□□ 2.04
PTPN18-205ENST00000428843 HELBQ8NG08 1087 aaPredicted RBP27.8■■■□□ 2.04
PTPN18-205ENST00000428843 TIAM2Q8IVF5 1701 aa27.8■■■□□ 2.04
PTPN18-205ENST00000428843 EYA2O00167 538 aa27.79■■■□□ 2.04
PTPN18-205ENST00000428843 POLA2Q14181 598 aa27.79■■■□□ 2.04
PTPN18-205ENST00000428843 AOC3Q16853 763 aa27.79■■■□□ 2.04
PTPN18-205ENST00000428843 GPR101Q96P66 508 aaPredicted RBP27.79■■■□□ 2.04
PTPN18-205ENST00000428843 SIL1Q9H173 461 aa27.79■■■□□ 2.04
PTPN18-205ENST00000428843 VPS33BQ9H267 617 aa27.79■■■□□ 2.04
PTPN18-205ENST00000428843 COPRSQ9NQ92 184 aa27.79■■■□□ 2.04
PTPN18-205ENST00000428843 WTIPA6NIX2 430 aaPredicted RBP27.78■■■□□ 2.04
PTPN18-205ENST00000428843 PPIP5K2O43314 1243 aa27.78■■■□□ 2.04
PTPN18-205ENST00000428843 TAF5LO75529 589 aa27.78■■■□□ 2.04
PTPN18-205ENST00000428843 SSH3Q8TE77 659 aa27.78■■■□□ 2.04
PTPN18-205ENST00000428843 COL4A5P29400 1685 aa27.78■■■□□ 2.04
PTPN18-205ENST00000428843 MROH5Q6ZUA9 1318 aa27.77■■■□□ 2.04
PTPN18-205ENST00000428843 LARGE2Q8N3Y3 721 aa27.77■■■□□ 2.04
PTPN18-205ENST00000428843 EYA3Q99504 573 aa27.77■■■□□ 2.04
PTPN18-205ENST00000428843 FBXO3Q9UK99 471 aa27.77■■■□□ 2.04
PTPN18-205ENST00000428843 LEMD3Q9Y2U8 911 aa27.77■■■□□ 2.04
PTPN18-205ENST00000428843 CIAO1O76071 339 aa27.76■■■□□ 2.03
PTPN18-205ENST00000428843 KIAA2012Q0VF49 1180 aa27.76■■■□□ 2.03
PTPN18-205ENST00000428843 WASHC4Q2M389 1173 aa27.76■■■□□ 2.03
PTPN18-205ENST00000428843 METTL24Q5JXM2 366 aa27.76■■■□□ 2.03
PTPN18-205ENST00000428843 ATG9AQ7Z3C6 839 aa27.76■■■□□ 2.03
PTPN18-205ENST00000428843 RIMBP2O15034 1052 aa27.75■■■□□ 2.03
PTPN18-205ENST00000428843 ZNF804BA4D1E1 1349 aa27.74■■■□□ 2.03
PTPN18-205ENST00000428843 SNAP23O00161 211 aa27.74■■■□□ 2.03
PTPN18-205ENST00000428843 KCNJ4P48050 445 aa27.74■■■□□ 2.03
PTPN18-205ENST00000428843 RPAP2Q8IXW5 612 aaPredicted RBP27.74■■■□□ 2.03
PTPN18-205ENST00000428843 VGLL2Q8N8G2 317 aa27.73■■■□□ 2.03
PTPN18-205ENST00000428843 ZC3H12CQ9C0D7 883 aaKnown RBP27.73■■■□□ 2.03
PTPN18-205ENST00000428843 YY1P25490 414 aa27.72■■■□□ 2.03
PTPN18-205ENST00000428843 IL15P40933 162 aaPredicted RBP27.72■■■□□ 2.03
PTPN18-205ENST00000428843 SIRT2Q8IXJ6 389 aa27.72■■■□□ 2.03
PTPN18-205ENST00000428843 JDP2Q8WYK2 163 aa27.72■■■□□ 2.03
PTPN18-205ENST00000428843 ZC3H4Q9UPT8 1303 aaKnown RBP27.71■■■□□ 2.03
PTPN18-205ENST00000428843 NIM1KQ8IY84 436 aa27.71■■■□□ 2.03
PTPN18-205ENST00000428843 MED23Q9ULK4 1368 aa27.71■■■□□ 2.03
PTPN18-205ENST00000428843 PDE8BO95263 885 aa27.7■■■□□ 2.02
PTPN18-205ENST00000428843 KLRK1P26718 216 aa27.69■■■□□ 2.02
PTPN18-205ENST00000428843 G3BP1Q13283 466 aaKnown RBP eCLIP27.69■■■□□ 2.02
PTPN18-205ENST00000428843 UBE4AQ14139 1066 aa27.69■■■□□ 2.02
PTPN18-205ENST00000428843 TXNRD3Q86VQ6 643 aa27.69■■■□□ 2.02
PTPN18-205ENST00000428843 CEP126Q9P2H0 1117 aa27.69■■■□□ 2.02
PTPN18-205ENST00000428843 FZD9O00144 591 aa27.68■■■□□ 2.02
PTPN18-205ENST00000428843 SURF6O75683 361 aaKnown RBP27.68■■■□□ 2.02
PTPN18-205ENST00000428843 IRX6P78412 446 aaPredicted RBP27.68■■■□□ 2.02
PTPN18-205ENST00000428843 DOK7Q18PE1 504 aa27.68■■■□□ 2.02
PTPN18-205ENST00000428843 EXOC6Q8TAG9 804 aa27.68■■■□□ 2.02
PTPN18-205ENST00000428843 DBNDD1Q9H9R9 158 aa27.68■■■□□ 2.02
PTPN18-205ENST00000428843 IRS2Q9Y4H2 1338 aa27.67■■■□□ 2.02
PTPN18-205ENST00000428843 HMMRO75330 724 aa27.67■■■□□ 2.02
PTPN18-205ENST00000428843 NOP58Q9Y2X3 529 aaKnown RBP27.67■■■□□ 2.02
PTPN18-205ENST00000428843 G3V3G9 751 aa27.66■■■□□ 2.02
PTPN18-205ENST00000428843 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
PTPN18-205ENST00000428843 DCAF8Q5TAQ9 597 aa27.66■■■□□ 2.02
PTPN18-205ENST00000428843 C15orf52Q6ZUT6 534 aaKnown RBP27.66■■■□□ 2.02
PTPN18-205ENST00000428843 ZNRF3Q9ULT6 936 aa27.66■■■□□ 2.02
PTPN18-205ENST00000428843 PCDHB15Q9Y5E8 787 aa27.66■■■□□ 2.02
PTPN18-205ENST00000428843 ZNF541Q9H0D2 1346 aa27.66■■■□□ 2.02
PTPN18-205ENST00000428843 ECE2O60344 883 aa27.65■■■□□ 2.02
PTPN18-205ENST00000428843 FGFR2P21802 821 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 371.6 ms