RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 HMGB1P1B2RPK0 211 aaPredicted RBP8.11□□□□□ -1.11
PAPD4-203ENST00000428308 PLEKHG6Q3KR16 790 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 SLC43A3Q8NBI5 491 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 IL17REQ8NFR9 667 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 CFAP53Q96M91 514 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
PAPD4-203ENST00000428308 IRF2BPLQ9H1B7 796 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 CAPN10Q9HC96 672 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
PAPD4-203ENST00000428308 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 PHF14O94880 888 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 APLP1P51693 650 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 PLEKHO1Q53GL0 409 aaPredicted RBP8.1□□□□□ -1.11
PAPD4-203ENST00000428308 C1orf141Q5JVX7 400 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 ASB16Q96NS5 453 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 MYH14Q7Z406 1995 aaKnown RBP8.1□□□□□ -1.11
PAPD4-203ENST00000428308 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 ITPK1Q13572 414 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
PAPD4-203ENST00000428308 PLEKHF1Q96S99 279 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
PAPD4-203ENST00000428308 SH3BP5O60239 455 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 MAPK1P28482 360 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 SOX11P35716 441 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 ZFYVE27Q5T4F4 411 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 RPUSD2Q8IZ73 545 aaKnown RBP8.09□□□□□ -1.11
PAPD4-203ENST00000428308 MRS2Q9HD23 443 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 G3BP2Q9UN86 482 aaKnown RBP8.09□□□□□ -1.11
PAPD4-203ENST00000428308 MRPL42Q9Y6G3 142 aaKnown RBP8.09□□□□□ -1.11
PAPD4-203ENST00000428308 PAPPAQ13219 1627 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 RGPD3A6NKT7 1758 aaPredicted RBP8.09□□□□□ -1.11
PAPD4-203ENST00000428308 RGPD4Q7Z3J3 1758 aa8.09□□□□□ -1.11
PAPD4-203ENST00000428308 PPP1R3GB7ZBB8 358 aa8.09□□□□□ -1.12
PAPD4-203ENST00000428308 GIGYF1O75420 1035 aaPredicted RBP8.09□□□□□ -1.12
PAPD4-203ENST00000428308 ATP2B4P23634 1241 aa8.09□□□□□ -1.12
PAPD4-203ENST00000428308 CABP4P57796 275 aa8.09□□□□□ -1.12
PAPD4-203ENST00000428308 FOXD4Q12950 439 aaPredicted RBP8.09□□□□□ -1.12
PAPD4-203ENST00000428308 SEMA3FQ13275 785 aa8.09□□□□□ -1.12
PAPD4-203ENST00000428308 RNF187Q5TA31 235 aaPredicted RBP8.09□□□□□ -1.12
PAPD4-203ENST00000428308 CLP1Q92989 425 aaKnown RBP8.09□□□□□ -1.12
PAPD4-203ENST00000428308 PCDH12Q9NPG4 1184 aa8.09□□□□□ -1.12
PAPD4-203ENST00000428308 TAF1LQ8IZX4 1826 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 MAP3K5Q99683 1374 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 LY75O60449 1722 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
PAPD4-203ENST00000428308 ANP32CO43423 234 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 KRT24Q2M2I5 525 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 PNMA2Q9UL42 364 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 PCDHB15Q9Y5E8 787 aa8.08□□□□□ -1.12
PAPD4-203ENST00000428308 H3BRB1 525 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 DNAJA1P31689 397 aaKnown RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 TBX4P57082 545 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 DCAF5Q96JK2 942 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 YTHDC1Q96MU7 727 aaKnown RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 NUDCQ9Y266 331 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 LZTS3O60299 673 aaPredicted RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 ATP6V1AP38606 617 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 TNNI2P48788 182 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 SIK1P57059 783 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
PAPD4-203ENST00000428308 AKAP4Q5JQC9 854 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 TSHZ1Q6ZSZ6 1077 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 PLPP6Q8IY26 295 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 MAF1Q9H063 256 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 CCSER2Q9H7U1 834 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 PRR12Q9ULL5 1215 aa8.07□□□□□ -1.12
PAPD4-203ENST00000428308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
PAPD4-203ENST00000428308 MOXD2PA6NHM9 499 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 APAF1O14727 1248 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 HSD3B2P26439 372 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 RBL2Q08999 1139 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 WDR43Q15061 677 aaKnown RBP eCLIP8.06□□□□□ -1.12
PAPD4-203ENST00000428308 AMOTQ4VCS5 1084 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 C4orf46Q504U0 113 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 FAM43BQ6ZT52 329 aaPredicted RBP8.06□□□□□ -1.12
PAPD4-203ENST00000428308 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 TGIF2Q9GZN2 237 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 ACBD3Q9H3P7 528 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 SLC52A2Q9HAB3 445 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 IFT57Q9NWB7 429 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 C5P01031 1676 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 HOXA2O43364 376 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 RIPK4P57078 832 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
PAPD4-203ENST00000428308 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 FILIP1Q7Z7B0 1213 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 GMLQ99445 158 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 OSBPL2Q9H1P3 480 aa8.06□□□□□ -1.12
PAPD4-203ENST00000428308 ABL1P00519 1130 aa8.05□□□□□ -1.12
PAPD4-203ENST00000428308 ZNF496Q96IT1 587 aaPredicted RBP8.05□□□□□ -1.12
PAPD4-203ENST00000428308 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
PAPD4-203ENST00000428308 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms