RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 CPDO75976 1380 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 DTNBO60941 627 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 ATL3Q6DD88 541 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 FAM173BQ6P4H8 233 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 Q6ZUG5 572 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 ATG9AQ7Z3C6 839 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 FERMT3Q86UX7 667 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 PLA2G4DQ86XP0 818 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 STOX1Q6ZVD7 989 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.29□□□□□ -0.92
LRCH3-204ENST00000428136 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 ATG3Q9NT62 314 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 SALL1Q9NSC2 1324 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 JAK2O60674 1132 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
LRCH3-204ENST00000428136 RBM10P98175 930 aaKnown RBP9.29□□□□□ -0.92
LRCH3-204ENST00000428136 SCRN1Q12765 414 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 DHX32Q7L7V1 743 aaKnown RBP9.29□□□□□ -0.92
LRCH3-204ENST00000428136 UBE3BQ7Z3V4 1068 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 CBX8Q9HC52 389 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 NLRP2Q9NX02 1062 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 RCOR1Q9UKL0 485 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 CFAP45Q9UL16 551 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 A0A087WZG4 1122 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 CDC25BP30305 580 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 EVCP57679 992 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 BRF1Q92994 677 aa9.29□□□□□ -0.92
LRCH3-204ENST00000428136 CIAO1O76071 339 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 LMOD2Q6P5Q4 547 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
LRCH3-204ENST00000428136 NSUN7Q8NE18 718 aaKnown RBP9.28□□□□□ -0.92
LRCH3-204ENST00000428136 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
LRCH3-204ENST00000428136 FAM13BQ9NYF5 915 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 TFIP11Q9UBB9 837 aaKnown RBP9.28□□□□□ -0.92
LRCH3-204ENST00000428136 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 NR1I2O75469 434 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 CTDNEP1O95476 244 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 CCDC129Q6ZRS4 1044 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 KCPQ6ZWJ8 1503 aa9.28□□□□□ -0.92
LRCH3-204ENST00000428136 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
LRCH3-204ENST00000428136 NBPF26B4DH59 902 aa9.27□□□□□ -0.92
LRCH3-204ENST00000428136 STK3Q13188 491 aa9.27□□□□□ -0.92
LRCH3-204ENST00000428136 ANO6Q4KMQ2 910 aa9.27□□□□□ -0.92
LRCH3-204ENST00000428136 NBPF14Q5TI25 921 aa9.27□□□□□ -0.92
LRCH3-204ENST00000428136 TNS3Q68CZ2 1445 aa9.27□□□□□ -0.92
LRCH3-204ENST00000428136 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.92
LRCH3-204ENST00000428136 NBPF15Q8N660 670 aa9.27□□□□□ -0.92
LRCH3-204ENST00000428136 IL15P40933 162 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-204ENST00000428136 ZNF75DP51815 510 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 CAMK4Q16566 473 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 SARM1Q6SZW1 724 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 LMBR1LQ6UX01 489 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 LUZP1Q86V48 1076 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 RGS22Q8NE09 1264 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 ZNF274Q96GC6 653 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-204ENST00000428136 PAG1Q9NWQ8 432 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 GOLGA6L4A6NEF3 574 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 CTAGE5O15320 804 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 CHGBP05060 677 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 CHMP4CQ96CF2 233 aa9.27□□□□□ -0.93
LRCH3-204ENST00000428136 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 CABP4P57796 275 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 IQCB1Q15051 598 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 DDX46Q7L014 1031 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 MPNDQ8N594 471 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 JARID2Q92833 1246 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 DNAJC2Q99543 621 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 CKAP2LQ8IYA6 745 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 CCDC191Q8NCU4 936 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 ENGASEQ8NFI3 743 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 FBXO3Q9UK99 471 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 NDUFB9Q9Y6M9 179 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 TNS2Q63HR2 1409 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 CTIFO43310 598 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 HSPD1P10809 573 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 SNW1Q13573 536 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 TPRNQ4KMQ1 711 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 DNTTIP2Q5QJE6 756 aaKnown RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 CWC25Q9NXE8 425 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-204ENST00000428136 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
LRCH3-204ENST00000428136 STRCP1A6NGW2 1772 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 NWD2Q9ULI1 1742 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 ERVV-2B6SEH9 535 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 E7EWF7 191 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 H3BQV1 296 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 EYA2O00167 538 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 RNF113AO15541 343 aaKnown RBP9.25□□□□□ -0.93
LRCH3-204ENST00000428136 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 PIP4K2AP48426 406 aaPredicted RBP9.25□□□□□ -0.93
LRCH3-204ENST00000428136 ZNF165P49910 485 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 ABCC12Q96J65 1359 aa9.25□□□□□ -0.93
LRCH3-204ENST00000428136 MAST3O60307 1309 aa9.24□□□□□ -0.93
LRCH3-204ENST00000428136 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms