RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 GGA1Q9UJY5 639 aa28.94■■■□□ 2.22
SEMA3C-204ENST00000427167 CASP7P55210 303 aa28.93■■■□□ 2.22
SEMA3C-204ENST00000427167 BEND3Q5T5X7 828 aa28.93■■■□□ 2.22
SEMA3C-204ENST00000427167 ECE2O60344 883 aa28.92■■■□□ 2.22
SEMA3C-204ENST00000427167 SLC4A10Q6U841 1118 aa28.92■■■□□ 2.22
SEMA3C-204ENST00000427167 PLA2G12BQ9BX93 195 aa28.92■■■□□ 2.22
SEMA3C-204ENST00000427167 ZC3H12CQ9C0D7 883 aaKnown RBP28.92■■■□□ 2.22
SEMA3C-204ENST00000427167 RTL9Q8NET4 1388 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 G3V3G9 751 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 SLFN5Q08AF3 891 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 FAM161AQ3B820 660 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 DCAF8Q5TAQ9 597 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 CNTROBQ8N137 903 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 CDCA7LQ96GN5 454 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 XDHP47989 1333 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 PASKQ96RG2 1323 aa28.91■■■□□ 2.22
SEMA3C-204ENST00000427167 ITGBL1O95965 494 aaPredicted RBP28.9■■■□□ 2.22
SEMA3C-204ENST00000427167 USP50Q70EL3 339 aaPredicted RBP28.9■■■□□ 2.22
SEMA3C-204ENST00000427167 ITGA6P23229 1130 aa28.89■■■□□ 2.22
SEMA3C-204ENST00000427167 ADARB2Q9NS39 739 aaKnown RBP28.89■■■□□ 2.22
SEMA3C-204ENST00000427167 BSDC1Q9NW68 430 aaPredicted RBP28.89■■■□□ 2.22
SEMA3C-204ENST00000427167 PSMD14O00487 310 aa28.88■■■□□ 2.21
SEMA3C-204ENST00000427167 IGHMBP2P38935 993 aaKnown RBP28.88■■■□□ 2.21
SEMA3C-204ENST00000427167 KCNQ5Q9NR82 932 aa28.88■■■□□ 2.21
SEMA3C-204ENST00000427167 CREBZFQ9NS37 354 aa28.88■■■□□ 2.21
SEMA3C-204ENST00000427167 ZBTB12Q9Y330 459 aaPredicted RBP28.88■■■□□ 2.21
SEMA3C-204ENST00000427167 MINPP1Q9UNW1 487 aa28.87■■■□□ 2.21
SEMA3C-204ENST00000427167 ATP2B4P23634 1241 aa28.86■■■□□ 2.21
SEMA3C-204ENST00000427167 MRPL50Q8N5N7 158 aaKnown RBP28.86■■■□□ 2.21
SEMA3C-204ENST00000427167 CHMP3Q9Y3E7 222 aa28.86■■■□□ 2.21
SEMA3C-204ENST00000427167 SHTN1A0MZ66 631 aa28.85■■■□□ 2.21
SEMA3C-204ENST00000427167 GRM8O00222 908 aa28.85■■■□□ 2.21
SEMA3C-204ENST00000427167 CSF1RP07333 972 aa28.85■■■□□ 2.21
SEMA3C-204ENST00000427167 SRCIN1Q9C0H9 1055 aa28.85■■■□□ 2.21
SEMA3C-204ENST00000427167 C9orf78Q9NZ63 289 aaPredicted RBP28.85■■■□□ 2.21
SEMA3C-204ENST00000427167 CNOT7Q9UIV1 285 aaKnown RBP28.85■■■□□ 2.21
SEMA3C-204ENST00000427167 WTIPA6NIX2 430 aaPredicted RBP28.84■■■□□ 2.21
SEMA3C-204ENST00000427167 MICALL2Q8IY33 904 aa28.84■■■□□ 2.21
SEMA3C-204ENST00000427167 MPHOSPH8Q99549 860 aa28.84■■■□□ 2.21
SEMA3C-204ENST00000427167 FOXO4P98177 505 aa28.83■■■□□ 2.21
SEMA3C-204ENST00000427167 SSH1Q8WYL5 1049 aa28.83■■■□□ 2.21
SEMA3C-204ENST00000427167 MKRN1Q9UHC7 482 aaKnown RBP28.83■■■□□ 2.21
SEMA3C-204ENST00000427167 ANKRD18BA2A2Z9 1011 aa28.82■■■□□ 2.2
SEMA3C-204ENST00000427167 TMEM88BA6NKF7 163 aa28.82■■■□□ 2.2
SEMA3C-204ENST00000427167 H7C1D1 291 aa28.82■■■□□ 2.2
SEMA3C-204ENST00000427167 ALDH1L1O75891 902 aa28.82■■■□□ 2.2
SEMA3C-204ENST00000427167 JMYQ8N9B5 988 aa28.82■■■□□ 2.2
SEMA3C-204ENST00000427167 SCN9AQ15858 1988 aa28.82■■■□□ 2.2
SEMA3C-204ENST00000427167 CCT4P50991 539 aaKnown RBP28.81■■■□□ 2.2
SEMA3C-204ENST00000427167 TRPM4Q8TD43 1214 aa28.81■■■□□ 2.2
SEMA3C-204ENST00000427167 IFIT5Q13325 482 aaKnown RBP28.8■■■□□ 2.2
SEMA3C-204ENST00000427167 EPHA10Q5JZY3 1008 aa28.8■■■□□ 2.2
SEMA3C-204ENST00000427167 LMBR1LQ6UX01 489 aa28.8■■■□□ 2.2
SEMA3C-204ENST00000427167 PTPRCP08575 1304 aa28.79■■■□□ 2.2
SEMA3C-204ENST00000427167 FMR1Q06787 632 aaKnown RBP eCLIP28.79■■■□□ 2.2
SEMA3C-204ENST00000427167 DIEXFQ68CQ4 756 aaKnown RBP28.79■■■□□ 2.2
SEMA3C-204ENST00000427167 DPF2Q92785 391 aa28.79■■■□□ 2.2
SEMA3C-204ENST00000427167 MED23Q9ULK4 1368 aa28.78■■■□□ 2.2
SEMA3C-204ENST00000427167 TRAF5O00463 557 aa28.78■■■□□ 2.2
SEMA3C-204ENST00000427167 RPS12P25398 132 aaKnown RBP28.78■■■□□ 2.2
SEMA3C-204ENST00000427167 HIRAP54198 1017 aaPredicted RBP28.78■■■□□ 2.2
SEMA3C-204ENST00000427167 SMC4Q9NTJ3 1288 aa28.78■■■□□ 2.2
SEMA3C-204ENST00000427167 SAMD7Q7Z3H4 446 aa28.77■■■□□ 2.2
SEMA3C-204ENST00000427167 TRMT2AQ8IZ69 625 aaKnown RBP28.77■■■□□ 2.2
SEMA3C-204ENST00000427167 MIER1Q8N108 512 aa28.77■■■□□ 2.2
SEMA3C-204ENST00000427167 ANKRD2Q9GZV1 360 aa28.77■■■□□ 2.2
SEMA3C-204ENST00000427167 VIL1P09327 827 aaKnown RBP28.76■■■□□ 2.19
SEMA3C-204ENST00000427167 CHRNDQ07001 517 aa28.76■■■□□ 2.19
SEMA3C-204ENST00000427167 TBC1D10BQ4KMP7 808 aaPredicted RBP28.76■■■□□ 2.19
SEMA3C-204ENST00000427167 LEMD3Q9Y2U8 911 aa28.76■■■□□ 2.19
SEMA3C-204ENST00000427167 KCNJ4P48050 445 aa28.75■■■□□ 2.19
SEMA3C-204ENST00000427167 CCDC57Q2TAC2 916 aa28.75■■■□□ 2.19
SEMA3C-204ENST00000427167 ALDH1L2Q3SY69 923 aa28.75■■■□□ 2.19
SEMA3C-204ENST00000427167 TAF7LQ5H9L4 462 aa28.75■■■□□ 2.19
SEMA3C-204ENST00000427167 RBM26Q5T8P6 1007 aaKnown RBP28.75■■■□□ 2.19
SEMA3C-204ENST00000427167 CNTNAP1P78357 1384 aa28.75■■■□□ 2.19
SEMA3C-204ENST00000427167 ZNF804BA4D1E1 1349 aa28.74■■■□□ 2.19
SEMA3C-204ENST00000427167 NBPF7P0C2Y1 421 aaPredicted RBP28.74■■■□□ 2.19
SEMA3C-204ENST00000427167 SUCLG2Q96I99 432 aa28.74■■■□□ 2.19
SEMA3C-204ENST00000427167 GLIS2Q9BZE0 524 aaPredicted RBP28.74■■■□□ 2.19
SEMA3C-204ENST00000427167 ABT1Q9ULW3 272 aaKnown RBP28.74■■■□□ 2.19
SEMA3C-204ENST00000427167 EGFRP00533 1210 aa28.73■■■□□ 2.19
SEMA3C-204ENST00000427167 KLRK1P26718 216 aa28.73■■■□□ 2.19
SEMA3C-204ENST00000427167 PODNQ7Z5L7 613 aa28.73■■■□□ 2.19
SEMA3C-204ENST00000427167 TXNRD3Q86VQ6 643 aa28.73■■■□□ 2.19
SEMA3C-204ENST00000427167 HELBQ8NG08 1087 aaPredicted RBP28.73■■■□□ 2.19
SEMA3C-204ENST00000427167 ZNF594Q96JF6 807 aaPredicted RBP28.73■■■□□ 2.19
SEMA3C-204ENST00000427167 PCNTO95613 3336 aa28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 USP17L3A6NCW0 530 aa28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 USP17L4A6NCW7 530 aa28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 RSBN1LQ6PCB5 846 aaPredicted RBP28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 USP17L1Q7RTZ2 530 aa28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 ZC3H15Q8WU90 426 aaKnown RBP28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 FBXW7Q969H0 707 aa28.72■■■□□ 2.19
SEMA3C-204ENST00000427167 PSME4Q14997 1843 aa28.71■■■□□ 2.19
SEMA3C-204ENST00000427167 TAF5LO75529 589 aa28.71■■■□□ 2.19
SEMA3C-204ENST00000427167 PGAP2Q9UHJ9 254 aa28.71■■■□□ 2.19
SEMA3C-204ENST00000427167 SNAP23O00161 211 aa28.7■■■□□ 2.18
SEMA3C-204ENST00000427167 COA1Q9GZY4 146 aa28.7■■■□□ 2.18
SEMA3C-204ENST00000427167 CT47B1P0C2W7 299 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms