RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 PSMD14O00487 310 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
GACAT3-201ENST00000426539 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
GACAT3-201ENST00000426539 CYP4F22Q6NT55 531 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 CCDC191Q8NCU4 936 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 CAPNS2Q96L46 248 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 METTL22Q9BUU2 404 aaPredicted RBP12.99□□□□□ -0.33
GACAT3-201ENST00000426539 TLL2Q9Y6L7 1015 aa12.99□□□□□ -0.33
GACAT3-201ENST00000426539 EGFRP00533 1210 aa12.98□□□□□ -0.33
GACAT3-201ENST00000426539 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
GACAT3-201ENST00000426539 LBX1P52954 281 aa12.98□□□□□ -0.33
GACAT3-201ENST00000426539 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
GACAT3-201ENST00000426539 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
GACAT3-201ENST00000426539 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
GACAT3-201ENST00000426539 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
GACAT3-201ENST00000426539 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
GACAT3-201ENST00000426539 AIDAQ96BJ3 306 aa12.98□□□□□ -0.33
GACAT3-201ENST00000426539 ECE2O60344 883 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 CELF2O95319 508 aaKnown RBP12.97□□□□□ -0.33
GACAT3-201ENST00000426539 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 DPF2Q92785 391 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
GACAT3-201ENST00000426539 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
GACAT3-201ENST00000426539 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
GACAT3-201ENST00000426539 THSD7BQ9C0I4 1608 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 H7C1D1 291 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 PDE8AO60658 829 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 MAP2K1Q02750 393 aaPredicted RBP12.96□□□□□ -0.33
GACAT3-201ENST00000426539 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
GACAT3-201ENST00000426539 SAPCD2Q86UD0 394 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 WWC1Q8IX03 1113 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 EYA3Q99504 573 aa12.96□□□□□ -0.33
GACAT3-201ENST00000426539 PI4KAP2A4QPH2 592 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 AOC2O75106 756 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 UFL1O94874 794 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 DDX58O95786 925 aaKnown RBP12.95□□□□□ -0.34
GACAT3-201ENST00000426539 ECE1P42892 770 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 GRM1Q13255 1194 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 TBC1D10BQ4KMP7 808 aaPredicted RBP12.95□□□□□ -0.34
GACAT3-201ENST00000426539 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 CDC37L1Q7L3B6 337 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 G2E3Q7L622 706 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 USP48Q86UV5 1035 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 PI4KAP1Q8N8J0 262 aa12.95□□□□□ -0.34
GACAT3-201ENST00000426539 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
GACAT3-201ENST00000426539 VIL1P09327 827 aaKnown RBP12.94□□□□□ -0.34
GACAT3-201ENST00000426539 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
GACAT3-201ENST00000426539 RPS12P25398 132 aaKnown RBP12.94□□□□□ -0.34
GACAT3-201ENST00000426539 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
GACAT3-201ENST00000426539 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
GACAT3-201ENST00000426539 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
GACAT3-201ENST00000426539 TRPM7Q96QT4 1865 aa12.93□□□□□ -0.34
GACAT3-201ENST00000426539 CTSWP56202 376 aa12.93□□□□□ -0.34
GACAT3-201ENST00000426539 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
GACAT3-201ENST00000426539 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
GACAT3-201ENST00000426539 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
GACAT3-201ENST00000426539 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
GACAT3-201ENST00000426539 HHIPL1Q96JK4 782 aa12.93□□□□□ -0.34
GACAT3-201ENST00000426539 ANKIB1Q9P2G1 1089 aa12.93□□□□□ -0.34
GACAT3-201ENST00000426539 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
GACAT3-201ENST00000426539 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 MAP2K2P36507 400 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 GREM2Q9H772 168 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 SSUH2Q9Y2M2 353 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 SCN9AQ15858 1988 aa12.92□□□□□ -0.34
GACAT3-201ENST00000426539 XDHP47989 1333 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 IL16Q14005 1332 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 H7C1W4 665 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 ZIC5Q96T25 663 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
GACAT3-201ENST00000426539 ZNF609O15014 1411 aa12.9□□□□□ -0.34
GACAT3-201ENST00000426539 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
GACAT3-201ENST00000426539 CASP7P55210 303 aa12.9□□□□□ -0.34
GACAT3-201ENST00000426539 ZNF280AP59817 542 aaPredicted RBP12.9□□□□□ -0.34
GACAT3-201ENST00000426539 RSBN1LQ6PCB5 846 aaPredicted RBP12.9□□□□□ -0.34
GACAT3-201ENST00000426539 GMLQ99445 158 aa12.9□□□□□ -0.34
GACAT3-201ENST00000426539 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
GACAT3-201ENST00000426539 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
GACAT3-201ENST00000426539 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
GACAT3-201ENST00000426539 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
GACAT3-201ENST00000426539 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
GACAT3-201ENST00000426539 CDC5LQ99459 802 aaKnown RBP12.89□□□□□ -0.35
GACAT3-201ENST00000426539 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
GACAT3-201ENST00000426539 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
GACAT3-201ENST00000426539 GGA3Q9NZ52 723 aa12.89□□□□□ -0.35
GACAT3-201ENST00000426539 FAM155AB1AL88 458 aaPredicted RBP12.88□□□□□ -0.35
GACAT3-201ENST00000426539 G3V3G9 751 aa12.88□□□□□ -0.35
GACAT3-201ENST00000426539 VAMP4O75379 141 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms