RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 RIMBP2O15034 1052 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 UFL1O94874 794 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 SCNN1DP51172 638 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 CXCL9Q07325 125 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 TNIP1Q15025 636 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 ALDH1L2Q3SY69 923 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 C9orf78Q9NZ63 289 aaPredicted RBP22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 ADAMTSL1Q8N6G6 1762 aa22.15■■□□□ 1.14
SLC6A1-202ENST00000425938 XDHP47989 1333 aa22.14■■□□□ 1.14
SLC6A1-202ENST00000425938 PASKQ96RG2 1323 aa22.14■■□□□ 1.14
SLC6A1-202ENST00000425938 GRM8O00222 908 aa22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 FAM161AQ3B820 660 aa22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 CIAPIN1Q6FI81 312 aa22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 BCL2L13Q9BXK5 485 aa22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 ZC3H12CQ9C0D7 883 aaKnown RBP22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 CREBZFQ9NS37 354 aa22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 BSDC1Q9NW68 430 aaPredicted RBP22.14■■□□□ 1.13
SLC6A1-202ENST00000425938 ITGBL1O95965 494 aaPredicted RBP22.13■■□□□ 1.13
SLC6A1-202ENST00000425938 CSF1RP07333 972 aa22.13■■□□□ 1.13
SLC6A1-202ENST00000425938 ITGA6P23229 1130 aa22.13■■□□□ 1.13
SLC6A1-202ENST00000425938 SMC4Q9NTJ3 1288 aa22.13■■□□□ 1.13
SLC6A1-202ENST00000425938 G3V3G9 751 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 RAD17O75943 681 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 ATP2B4P23634 1241 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 EPS15P42566 896 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 DCAF8Q5TAQ9 597 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 MPHOSPH8Q99549 860 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 DBNDD1Q9H9R9 158 aa22.12■■□□□ 1.13
SLC6A1-202ENST00000425938 ANKRD18BA2A2Z9 1011 aa22.11■■□□□ 1.13
SLC6A1-202ENST00000425938 USP50Q70EL3 339 aaPredicted RBP22.11■■□□□ 1.13
SLC6A1-202ENST00000425938 GPR101Q96P66 508 aaPredicted RBP22.11■■□□□ 1.13
SLC6A1-202ENST00000425938 CHMP3Q9Y3E7 222 aa22.11■■□□□ 1.13
SLC6A1-202ENST00000425938 YDJCA8MPS7 323 aa22.1■■□□□ 1.13
SLC6A1-202ENST00000425938 ECE2O60344 883 aa22.1■■□□□ 1.13
SLC6A1-202ENST00000425938 MAP1SQ66K74 1059 aaPredicted RBP22.1■■□□□ 1.13
SLC6A1-202ENST00000425938 CNTROBQ8N137 903 aa22.1■■□□□ 1.13
SLC6A1-202ENST00000425938 GPRC5DQ9NZD1 345 aa22.1■■□□□ 1.13
SLC6A1-202ENST00000425938 MINPP1Q9UNW1 487 aa22.1■■□□□ 1.13
SLC6A1-202ENST00000425938 GMPSP49915 693 aaPredicted RBP22.09■■□□□ 1.13
SLC6A1-202ENST00000425938 FOXO4P98177 505 aa22.09■■□□□ 1.13
SLC6A1-202ENST00000425938 IFIT5Q13325 482 aaKnown RBP22.09■■□□□ 1.13
SLC6A1-202ENST00000425938 DOK7Q18PE1 504 aa22.09■■□□□ 1.13
SLC6A1-202ENST00000425938 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.13
SLC6A1-202ENST00000425938 ADARB2Q9NS39 739 aaKnown RBP22.08■■□□□ 1.13
SLC6A1-202ENST00000425938 TMEM88BA6NKF7 163 aa22.07■■□□□ 1.12
SLC6A1-202ENST00000425938 LMBR1LQ6UX01 489 aa22.07■■□□□ 1.12
SLC6A1-202ENST00000425938 ANKRD2Q9GZV1 360 aa22.07■■□□□ 1.12
SLC6A1-202ENST00000425938 PCNTO95613 3336 aa22.07■■□□□ 1.12
SLC6A1-202ENST00000425938 CCT4P50991 539 aaKnown RBP22.06■■□□□ 1.12
SLC6A1-202ENST00000425938 CCDC57Q2TAC2 916 aa22.06■■□□□ 1.12
SLC6A1-202ENST00000425938 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
SLC6A1-202ENST00000425938 SCN9AQ15858 1988 aa22.06■■□□□ 1.12
SLC6A1-202ENST00000425938 PSMD14O00487 310 aa22.05■■□□□ 1.12
SLC6A1-202ENST00000425938 EPHA10Q5JZY3 1008 aa22.05■■□□□ 1.12
SLC6A1-202ENST00000425938 LEMD3Q9Y2U8 911 aa22.05■■□□□ 1.12
SLC6A1-202ENST00000425938 MED23Q9ULK4 1368 aa22.04■■□□□ 1.12
SLC6A1-202ENST00000425938 NBPF7P0C2Y1 421 aaPredicted RBP22.04■■□□□ 1.12
SLC6A1-202ENST00000425938 MKRN1Q9UHC7 482 aaKnown RBP22.04■■□□□ 1.12
SLC6A1-202ENST00000425938 UTYO14607 1347 aa22.04■■□□□ 1.12
SLC6A1-202ENST00000425938 H7C1D1 291 aa22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 RPS12P25398 132 aaKnown RBP22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 KCNJ4P48050 445 aa22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 DPF2Q92785 391 aa22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 SUCLG2Q96I99 432 aa22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 CNOT7Q9UIV1 285 aaKnown RBP22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 NOB1Q9ULX3 412 aaKnown RBP22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 ZBTB12Q9Y330 459 aaPredicted RBP22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 PSME4Q14997 1843 aa22.03■■□□□ 1.12
SLC6A1-202ENST00000425938 CNTNAP1P78357 1384 aa22.02■■□□□ 1.12
SLC6A1-202ENST00000425938 RARSP54136 660 aaKnown RBP22.02■■□□□ 1.12
SLC6A1-202ENST00000425938 BRPF1P55201 1214 aaPredicted RBP22.02■■□□□ 1.12
SLC6A1-202ENST00000425938 CHRNDQ07001 517 aa22.02■■□□□ 1.12
SLC6A1-202ENST00000425938 API5Q9BZZ5 524 aaKnown RBP22.02■■□□□ 1.12
SLC6A1-202ENST00000425938 ZNF804BA4D1E1 1349 aa22.02■■□□□ 1.12
SLC6A1-202ENST00000425938 PODNQ7Z5L7 613 aa22.01■■□□□ 1.11
SLC6A1-202ENST00000425938 MICALL2Q8IY33 904 aa22.01■■□□□ 1.11
SLC6A1-202ENST00000425938 KCNQ5Q9NR82 932 aa22.01■■□□□ 1.11
SLC6A1-202ENST00000425938 LDHAL6AQ6ZMR3 332 aa22■■□□□ 1.11
SLC6A1-202ENST00000425938 ZC3H15Q8WU90 426 aaKnown RBP22■■□□□ 1.11
SLC6A1-202ENST00000425938 KAZALD1Q96I82 304 aa22■■□□□ 1.11
SLC6A1-202ENST00000425938 KIF16BQ96L93 1317 aa22■■□□□ 1.11
SLC6A1-202ENST00000425938 A0A1B0GUL6 1792 aa21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 WTIPA6NIX2 430 aaPredicted RBP21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 VIL1P09327 827 aaKnown RBP21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 ZNF594Q96JF6 807 aaPredicted RBP21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 BICC1Q9H694 974 aaKnown RBP21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 CNNM1Q9NRU3 951 aa21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 PGAP2Q9UHJ9 254 aa21.99■■□□□ 1.11
SLC6A1-202ENST00000425938 RABL6Q3YEC7 729 aaPredicted RBP21.98■■□□□ 1.11
SLC6A1-202ENST00000425938 COA1Q9GZY4 146 aa21.98■■□□□ 1.11
SLC6A1-202ENST00000425938 USP44Q9H0E7 712 aa21.98■■□□□ 1.11
SLC6A1-202ENST00000425938 USP17L3A6NCW0 530 aa21.97■■□□□ 1.11
SLC6A1-202ENST00000425938 USP17L4A6NCW7 530 aa21.97■■□□□ 1.11
SLC6A1-202ENST00000425938 HIRAP54198 1017 aaPredicted RBP21.97■■□□□ 1.11
SLC6A1-202ENST00000425938 IFFO2Q5TF58 517 aa21.97■■□□□ 1.11
SLC6A1-202ENST00000425938 USP17L1Q7RTZ2 530 aa21.97■■□□□ 1.11
SLC6A1-202ENST00000425938 SHTN1A0MZ66 631 aa21.96■■□□□ 1.11
SLC6A1-202ENST00000425938 RASSF10A6NK89 507 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms