RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 ATG3Q9NT62 314 aa6.08□□□□□ -1.44
R3HDM1-205ENST00000425804 TLR7Q9NYK1 1049 aaKnown RBP6.08□□□□□ -1.44
R3HDM1-205ENST00000425804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.08□□□□□ -1.44
R3HDM1-205ENST00000425804 PRRG2O14669 202 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 ZBTB7BO15156 539 aaPredicted RBP6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 FARP2O94887 1054 aaPredicted RBP6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 SOX11P35716 441 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 RTN1Q16799 776 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 CCDC102BQ68D86 513 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 DEPDC4Q8N2C3 294 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 STAG2Q8N3U4 1231 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 GIMAP7Q8NHV1 300 aa6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 NSUN5Q96P11 429 aaKnown RBP6.07□□□□□ -1.44
R3HDM1-205ENST00000425804 TM4SF5O14894 197 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 PREPP48147 710 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 DUOXA2Q1HG44 320 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 WASHC4Q2M389 1173 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 LILRA6Q6PI73 481 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 TXNDC11Q6PKC3 985 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 FBXL6Q8N531 539 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 TSEN2Q8NCE0 465 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 C11orf16Q9NQ32 467 aa6.06□□□□□ -1.44
R3HDM1-205ENST00000425804 M0R2N6 131 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 F13BP05160 661 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 ARSDP51689 593 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 TRIM50Q86XT4 487 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 CACTIN-AS1Q8N1I8 211 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 AGBL5Q8NDL9 886 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 IL27Q8NEV9 243 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 FLCNQ8NFG4 579 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 CARD10Q9BWT7 1032 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 OSBPL1AQ9BXW6 950 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 RBSNQ9H1K0 784 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 CARMIL2Q6F5E8 1435 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 ATAD2Q6PL18 1390 aa6.05□□□□□ -1.44
R3HDM1-205ENST00000425804 ABL2P42684 1182 aa6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 NFATC2IPQ8NCF5 419 aa6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 UBASH3BQ8TF42 649 aa6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 CHMP7Q8WUX9 453 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 PAK6Q9NQU5 681 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 BSDC1Q9NW68 430 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 HIF3AQ9Y2N7 669 aa6.04□□□□□ -1.44
R3HDM1-205ENST00000425804 USP17L5A8MUK1 530 aa6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 B8ZZF3 427 aa6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 PSAPP07602 524 aa6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 CLDN10P78369 228 aa6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 CPSF6Q16630 551 aaKnown RBP eCLIP6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 KSR1Q8IVT5 923 aa6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 FOXD4L4Q8WXT5 416 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 GDPD2Q9HCC8 539 aa6.03□□□□□ -1.44
R3HDM1-205ENST00000425804 DDX3YO15523 660 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 ADAM11O75078 769 aa6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 BUD31P41223 144 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 TMEM132AQ24JP5 1023 aa6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 ANKRD34AQ69YU3 496 aa6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 KLK14Q9P0G3 267 aa6.02□□□□□ -1.45
R3HDM1-205ENST00000425804 MMP20O60882 483 aa6.01□□□□□ -1.45
R3HDM1-205ENST00000425804 HOXD8P13378 290 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-205ENST00000425804 MAP4P27816 1152 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-205ENST00000425804 CDC25BP30305 580 aa6.01□□□□□ -1.45
R3HDM1-205ENST00000425804 ATP1A2P50993 1020 aa6.01□□□□□ -1.45
R3HDM1-205ENST00000425804 SHISA5Q8N114 240 aa6.01□□□□□ -1.45
R3HDM1-205ENST00000425804 BIN1O00499 593 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 FSCN2O14926 492 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 EGFRP00533 1210 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 RASA1P20936 1047 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 SOX18P35713 384 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 KLHL23Q8NBE8 558 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 GAS2L2Q8NHY3 880 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 LACRTQ9GZZ8 138 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 USP20Q9Y2K6 914 aa6□□□□□ -1.45
R3HDM1-205ENST00000425804 CYP26A1O43174 497 aa5.99□□□□□ -1.45
R3HDM1-205ENST00000425804 XYLBO75191 536 aa5.99□□□□□ -1.45
R3HDM1-205ENST00000425804 SGO2Q562F6 1265 aa5.99□□□□□ -1.45
R3HDM1-205ENST00000425804 SLC38A3Q99624 504 aa5.99□□□□□ -1.45
R3HDM1-205ENST00000425804 GAS2O43903 313 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 MICAL2O94851 1124 aa5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 CDC27P30260 824 aa5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 FDX2Q6P4F2 183 aa5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 METTL22Q9BUU2 404 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 RNF208Q9H0X6 261 aa5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 RTCBQ9Y3I0 505 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-205ENST00000425804 RXRBP28702 533 aa5.97□□□□□ -1.45
R3HDM1-205ENST00000425804 DGKZQ13574 1117 aa5.97□□□□□ -1.45
R3HDM1-205ENST00000425804 CILP2Q8IUL8 1156 aa5.97□□□□□ -1.45
R3HDM1-205ENST00000425804 LARGE2Q8N3Y3 721 aa5.97□□□□□ -1.45
R3HDM1-205ENST00000425804 OGFOD1Q8N543 542 aa5.97□□□□□ -1.45
R3HDM1-205ENST00000425804 PALM3A6NDB9 673 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 ATP11AP98196 1134 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 ZNF792Q3KQV3 632 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 FAM117BQ6P1L5 589 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 ADAMTSL4Q6UY14 1074 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 SIX5Q8N196 739 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 KLHDC7BQ96G42 594 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 ALG2Q9H553 416 aa5.96□□□□□ -1.46
R3HDM1-205ENST00000425804 OPLAHO14841 1288 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms