RNA–Protein interactions for RNA: ENST00000425654.6

CNKSR2-203, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 1 (best) BASIC

Gene CNKSR2, Length 5,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-203ENST00000425654 TRAF1Q13077 416 aa16.39■□□□□ 0.21
CNKSR2-203ENST00000425654 FLT4P35916 1363 aa16.39■□□□□ 0.21
CNKSR2-203ENST00000425654 FERMT2Q96AC1 680 aa16.39■□□□□ 0.21
CNKSR2-203ENST00000425654 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
CNKSR2-203ENST00000425654 F13A1P00488 732 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 STAT6P42226 847 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 SPECC1Q5M775 1068 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 PAG1Q9NWQ8 432 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 GNG11P61952 73 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 SLC9C2Q5TAH2 1124 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 ANO6Q4KMQ2 910 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 MYO1BO43795 1136 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 ATP10BO94823 1461 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 PTPRKQ15262 1439 aa16.38■□□□□ 0.21
CNKSR2-203ENST00000425654 CCDC172P0C7W6 258 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 JADE2Q9NQC1 790 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 POLR3GO15318 223 aaPredicted RBP16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 SPAG1Q07617 926 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 MICALCLQ6ZW33 695 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 FAM200AQ8TCP9 573 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 AFMP43652 599 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 ZFYVE9O95405 1425 aa16.37■□□□□ 0.21
CNKSR2-203ENST00000425654 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 CALCOCO1Q9P1Z2 691 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 AKR1B10O60218 316 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 ZNF518AQ6AHZ1 1483 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 CTR9Q6PD62 1173 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 CCDC174Q6PII3 467 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 GNAT2P19087 354 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
CNKSR2-203ENST00000425654 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 TRMT1LQ7Z2T5 733 aaKnown RBP16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 TEX14Q8IWB6 1497 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 GOLGA6L10A0A0M3HER8 536 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 VAMP4O75379 141 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 CYLC1P35663 651 aaPredicted RBP16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 MPHOSPH6Q99547 160 aaKnown RBP16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 CALM1P0DP23 149 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 CALM2P0DP24 149 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 CALM3P0DP25 149 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 NPATQ14207 1427 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
CNKSR2-203ENST00000425654 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 ABCC1P33527 1531 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 CKAP4Q07065 602 aaKnown RBP16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 FAM107BQ9H098 131 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 ZNF804AQ7Z570 1209 aa16.34■□□□□ 0.21
CNKSR2-203ENST00000425654 BMS1Q14692 1282 aaKnown RBP16.33■□□□□ 0.21
CNKSR2-203ENST00000425654 BICD1Q96G01 975 aa16.33■□□□□ 0.21
CNKSR2-203ENST00000425654 PSMA7O14818 248 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 SPAG5Q96R06 1193 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 NAPAP54920 295 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 USP37Q86T82 979 aa16.33■□□□□ 0.2
CNKSR2-203ENST00000425654 CCDC175P0C221 793 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 SKILP12757 684 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 MARCKSP29966 332 aaPredicted RBP16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 MAATS1Q7Z4T9 603 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 SPTLC2O15270 562 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 NUP153P49790 1475 aaKnown RBP16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 RAD50Q92878 1312 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 IL2RBP14784 551 aa16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 RNF187Q5TA31 235 aaPredicted RBP16.32■□□□□ 0.2
CNKSR2-203ENST00000425654 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms