RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 DUOX1Q9NRD9 1551 aa19.6■□□□□ 0.73
LIMK2-205ENST00000425203 VIL1P09327 827 aaKnown RBP19.59■□□□□ 0.73
LIMK2-205ENST00000425203 ZNF157P51786 506 aaPredicted RBP19.59■□□□□ 0.73
LIMK2-205ENST00000425203 KIF23Q02241 960 aaPredicted RBP19.59■□□□□ 0.73
LIMK2-205ENST00000425203 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
LIMK2-205ENST00000425203 POLR2AP24928 1970 aaKnown RBP19.59■□□□□ 0.73
LIMK2-205ENST00000425203 IRS4O14654 1257 aaPredicted RBP19.58■□□□□ 0.72
LIMK2-205ENST00000425203 SULF1Q8IWU6 871 aa19.58■□□□□ 0.72
LIMK2-205ENST00000425203 PODXL2Q9NZ53 605 aa19.58■□□□□ 0.72
LIMK2-205ENST00000425203 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.72
LIMK2-205ENST00000425203 PDE4DIPQ5VU43 2346 aa19.58■□□□□ 0.72
LIMK2-205ENST00000425203 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
LIMK2-205ENST00000425203 ADM5C9JUS6 153 aa19.57■□□□□ 0.72
LIMK2-205ENST00000425203 G3V3G9 751 aa19.57■□□□□ 0.72
LIMK2-205ENST00000425203 HSP90B1P14625 803 aaKnown RBP19.57■□□□□ 0.72
LIMK2-205ENST00000425203 KIF4BQ2VIQ3 1234 aa19.57■□□□□ 0.72
LIMK2-205ENST00000425203 DCAF8Q5TAQ9 597 aa19.57■□□□□ 0.72
LIMK2-205ENST00000425203 RUNDC1Q96C34 613 aa19.57■□□□□ 0.72
LIMK2-205ENST00000425203 TRPA1O75762 1119 aa19.56■□□□□ 0.72
LIMK2-205ENST00000425203 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
LIMK2-205ENST00000425203 RNF186Q9NXI6 227 aa19.56■□□□□ 0.72
LIMK2-205ENST00000425203 LRRC37AA6NMS7 1700 aa19.56■□□□□ 0.72
LIMK2-205ENST00000425203 ZBTB38Q8NAP3 1195 aaPredicted RBP19.55■□□□□ 0.72
LIMK2-205ENST00000425203 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
LIMK2-205ENST00000425203 ANKIB1Q9P2G1 1089 aa19.55■□□□□ 0.72
LIMK2-205ENST00000425203 DUSP27Q5VZP5 1158 aa19.54■□□□□ 0.72
LIMK2-205ENST00000425203 RIC3Q7Z5B4 369 aa19.54■□□□□ 0.72
LIMK2-205ENST00000425203 REM2Q8IYK8 340 aaPredicted RBP19.54■□□□□ 0.72
LIMK2-205ENST00000425203 AGBL3Q8NEM8 1001 aa19.54■□□□□ 0.72
LIMK2-205ENST00000425203 GGA3Q9NZ52 723 aa19.54■□□□□ 0.72
LIMK2-205ENST00000425203 TNRC18O15417 2968 aaPredicted RBP19.53■□□□□ 0.72
LIMK2-205ENST00000425203 SLC10A3P09131 477 aa19.53■□□□□ 0.72
LIMK2-205ENST00000425203 SEC31BQ9NQW1 1179 aa19.53■□□□□ 0.72
LIMK2-205ENST00000425203 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
LIMK2-205ENST00000425203 DDX60Q8IY21 1712 aaKnown RBP19.53■□□□□ 0.72
LIMK2-205ENST00000425203 UFL1O94874 794 aa19.52■□□□□ 0.72
LIMK2-205ENST00000425203 ZNF280AP59817 542 aaPredicted RBP19.52■□□□□ 0.72
LIMK2-205ENST00000425203 SCARF1Q14162 830 aa19.52■□□□□ 0.72
LIMK2-205ENST00000425203 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.72
LIMK2-205ENST00000425203 CDCA5Q96FF9 252 aa19.52■□□□□ 0.72
LIMK2-205ENST00000425203 FKBP1BP68106 108 aa19.51■□□□□ 0.71
LIMK2-205ENST00000425203 GOLGA2Q08379 1002 aa19.51■□□□□ 0.71
LIMK2-205ENST00000425203 WDR43Q15061 677 aaKnown RBP eCLIP19.51■□□□□ 0.71
LIMK2-205ENST00000425203 CCDC152Q4G0S7 254 aa19.51■□□□□ 0.71
LIMK2-205ENST00000425203 ASTN2O75129 1339 aaPredicted RBP19.51■□□□□ 0.71
LIMK2-205ENST00000425203 ANGEL2Q5VTE6 544 aaKnown RBP19.5■□□□□ 0.71
LIMK2-205ENST00000425203 CCDC191Q8NCU4 936 aa19.5■□□□□ 0.71
LIMK2-205ENST00000425203 PCDH10Q9P2E7 1040 aa19.5■□□□□ 0.71
LIMK2-205ENST00000425203 MYBBP1AQ9BQG0 1328 aaKnown RBP19.5■□□□□ 0.71
LIMK2-205ENST00000425203 PDE8AO60658 829 aa19.49■□□□□ 0.71
LIMK2-205ENST00000425203 PCCAP05165 728 aaPredicted RBP19.49■□□□□ 0.71
LIMK2-205ENST00000425203 USP17L8P0C7I0 530 aa19.49■□□□□ 0.71
LIMK2-205ENST00000425203 PODNQ7Z5L7 613 aa19.49■□□□□ 0.71
LIMK2-205ENST00000425203 GMLQ99445 158 aa19.49■□□□□ 0.71
LIMK2-205ENST00000425203 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
LIMK2-205ENST00000425203 MBIPQ9NS73 344 aa19.49■□□□□ 0.71
LIMK2-205ENST00000425203 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
LIMK2-205ENST00000425203 CTU1Q7Z7A3 348 aaKnown RBP19.48■□□□□ 0.71
LIMK2-205ENST00000425203 MYD88Q99836 296 aa19.48■□□□□ 0.71
LIMK2-205ENST00000425203 MYOZ2Q9NPC6 264 aa19.48■□□□□ 0.71
LIMK2-205ENST00000425203 XDHP47989 1333 aa19.48■□□□□ 0.71
LIMK2-205ENST00000425203 COL4A1P02462 1669 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 SCN9AQ15858 1988 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 USP17L3A6NCW0 530 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 USP17L4A6NCW7 530 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 USP17L1Q7RTZ2 530 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 ZNF609O15014 1411 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 PITPNM2Q9BZ72 1349 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 AKAP11Q9UKA4 1901 aa19.47■□□□□ 0.71
LIMK2-205ENST00000425203 ATP2B4P23634 1241 aa19.46■□□□□ 0.71
LIMK2-205ENST00000425203 RASAL3Q86YV0 1011 aa19.46■□□□□ 0.71
LIMK2-205ENST00000425203 ANKRD18AQ8IVF6 992 aa19.46■□□□□ 0.71
LIMK2-205ENST00000425203 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
LIMK2-205ENST00000425203 CWC25Q9NXE8 425 aaPredicted RBP19.46■□□□□ 0.71
LIMK2-205ENST00000425203 ELL2O00472 640 aaPredicted RBP19.45■□□□□ 0.7
LIMK2-205ENST00000425203 SOX10P56693 466 aa19.45■□□□□ 0.7
LIMK2-205ENST00000425203 CCDC85AQ96PX6 553 aaPredicted RBP19.45■□□□□ 0.7
LIMK2-205ENST00000425203 GNAI1P63096 354 aa19.44■□□□□ 0.7
LIMK2-205ENST00000425203 JARID2Q92833 1246 aaPredicted RBP19.44■□□□□ 0.7
LIMK2-205ENST00000425203 METTL22Q9BUU2 404 aaPredicted RBP19.44■□□□□ 0.7
LIMK2-205ENST00000425203 IFT57Q9NWB7 429 aa19.44■□□□□ 0.7
LIMK2-205ENST00000425203 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
LIMK2-205ENST00000425203 CALD1Q05682 793 aaKnown RBP19.43■□□□□ 0.7
LIMK2-205ENST00000425203 PKN2Q16513 984 aaKnown RBP19.43■□□□□ 0.7
LIMK2-205ENST00000425203 UBE2Q2LH0YL09 131 aa19.42■□□□□ 0.7
LIMK2-205ENST00000425203 DDX10Q13206 875 aaKnown RBP19.42■□□□□ 0.7
LIMK2-205ENST00000425203 OGFOD1Q8N543 542 aa19.42■□□□□ 0.7
LIMK2-205ENST00000425203 CDC5LQ99459 802 aaKnown RBP19.42■□□□□ 0.7
LIMK2-205ENST00000425203 BSDC1Q9NW68 430 aaPredicted RBP19.42■□□□□ 0.7
LIMK2-205ENST00000425203 NBPF9Q3BBW0 867 aa19.41■□□□□ 0.7
LIMK2-205ENST00000425203 MOB2Q70IA6 237 aa19.41■□□□□ 0.7
LIMK2-205ENST00000425203 HDAC9Q9UKV0 1011 aa19.41■□□□□ 0.7
LIMK2-205ENST00000425203 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
LIMK2-205ENST00000425203 TM4SF4P48230 202 aa19.4■□□□□ 0.7
LIMK2-205ENST00000425203 MMP14P50281 582 aa19.4■□□□□ 0.7
LIMK2-205ENST00000425203 CCDC30Q5VVM6 783 aa19.4■□□□□ 0.7
LIMK2-205ENST00000425203 PRAMEF18Q5VWM3 479 aa19.4■□□□□ 0.7
LIMK2-205ENST00000425203 SCAF8Q9UPN6 1271 aaKnown RBP19.4■□□□□ 0.7
LIMK2-205ENST00000425203 HPS5Q9UPZ3 1129 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms