RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 METTL24Q5JXM2 366 aa16.61■□□□□ 0.25
PRPF39-202ENST00000424478 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
PRPF39-202ENST00000424478 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
PRPF39-202ENST00000424478 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
PRPF39-202ENST00000424478 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
PRPF39-202ENST00000424478 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
PRPF39-202ENST00000424478 PDE6BP35913 854 aa16.6■□□□□ 0.25
PRPF39-202ENST00000424478 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
PRPF39-202ENST00000424478 CDC5LQ99459 802 aaKnown RBP16.6■□□□□ 0.25
PRPF39-202ENST00000424478 H0YIN7 160 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 AACSQ86V21 672 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 CHRNDQ07001 517 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 ADORA1P30542 326 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 GRAPQ13588 217 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 GRAPLQ8TC17 118 aaPredicted RBP16.59■□□□□ 0.25
PRPF39-202ENST00000424478 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 KLRK1P26718 216 aa16.58■□□□□ 0.24
PRPF39-202ENST00000424478 RBM17Q96I25 401 aaKnown RBP16.58■□□□□ 0.24
PRPF39-202ENST00000424478 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
PRPF39-202ENST00000424478 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
PRPF39-202ENST00000424478 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
PRPF39-202ENST00000424478 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
PRPF39-202ENST00000424478 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-202ENST00000424478 KCNA3P22001 575 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 DBNDD2Q9BQY9 259 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-202ENST00000424478 NPR1P16066 1061 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
PRPF39-202ENST00000424478 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
PRPF39-202ENST00000424478 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
PRPF39-202ENST00000424478 A0A1B0GUL7 405 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 HOXA10P31260 410 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 HSP90AB4PQ58FF6 505 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 LRP5O75197 1615 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 C21orf2O43822 256 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 CIAO1O76071 339 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 GPSM2P81274 684 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 PDE8BO95263 885 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
PRPF39-202ENST00000424478 TXNRD3Q86VQ6 643 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
PRPF39-202ENST00000424478 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
PRPF39-202ENST00000424478 CRAMP1Q96RY5 1269 aa16.53■□□□□ 0.24
PRPF39-202ENST00000424478 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
PRPF39-202ENST00000424478 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
PRPF39-202ENST00000424478 JAG2Q9Y219 1238 aa16.52■□□□□ 0.24
PRPF39-202ENST00000424478 A0A1B0GUL6 1792 aa16.52■□□□□ 0.23
PRPF39-202ENST00000424478 GYG1P46976 350 aa16.52■□□□□ 0.23
PRPF39-202ENST00000424478 MX1P20591 662 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 KIAA1551Q9HCM1 1747 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 ZNF609O15014 1411 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 KCNJ4P48050 445 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 RIMBP2O15034 1052 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BCAMP50895 628 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 PDE1AP54750 535 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BCS1LQ9Y276 419 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 KIF13BQ9NQT8 1826 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BBOX1O75936 387 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 UFL1O94874 794 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 SCARF1Q14162 830 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 PHKA1P46020 1223 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 PUM3Q15397 648 aaKnown RBP16.49■□□□□ 0.23
PRPF39-202ENST00000424478 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 ATP6V0A2Q9Y487 856 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
PRPF39-202ENST00000424478 FGFR2P21802 821 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 PIM2Q9P1W9 311 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 CHGBP05060 677 aa16.47■□□□□ 0.23
PRPF39-202ENST00000424478 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
PRPF39-202ENST00000424478 PI4K2BQ8TCG2 481 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms