RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 EYA3Q99504 573 aa24.95■■□□□ 1.58
FBXO28-202ENST00000424254 SRCIN1Q9C0H9 1055 aa24.95■■□□□ 1.58
FBXO28-202ENST00000424254 DBNDD1Q9H9R9 158 aa24.95■■□□□ 1.58
FBXO28-202ENST00000424254 BSDC1Q9NW68 430 aaPredicted RBP24.95■■□□□ 1.58
FBXO28-202ENST00000424254 GGA1Q9UJY5 639 aa24.95■■□□□ 1.58
FBXO28-202ENST00000424254 LMOD1P29536 600 aaPredicted RBP24.94■■□□□ 1.58
FBXO28-202ENST00000424254 FOXO4P98177 505 aa24.94■■□□□ 1.58
FBXO28-202ENST00000424254 CIAPIN1Q6FI81 312 aa24.94■■□□□ 1.58
FBXO28-202ENST00000424254 PTPRCP08575 1304 aa24.94■■□□□ 1.58
FBXO28-202ENST00000424254 XDHP47989 1333 aa24.94■■□□□ 1.58
FBXO28-202ENST00000424254 SCN4AP35499 1836 aa24.93■■□□□ 1.58
FBXO28-202ENST00000424254 DOK7Q18PE1 504 aa24.93■■□□□ 1.58
FBXO28-202ENST00000424254 PNMA8AQ86V59 439 aaPredicted RBP24.93■■□□□ 1.58
FBXO28-202ENST00000424254 MINPP1Q9UNW1 487 aa24.93■■□□□ 1.58
FBXO28-202ENST00000424254 ALDH1L2Q3SY69 923 aa24.92■■□□□ 1.58
FBXO28-202ENST00000424254 EPHA10Q5JZY3 1008 aa24.92■■□□□ 1.58
FBXO28-202ENST00000424254 IGHMBP2P38935 993 aaKnown RBP24.91■■□□□ 1.58
FBXO28-202ENST00000424254 GMPSP49915 693 aaPredicted RBP24.91■■□□□ 1.58
FBXO28-202ENST00000424254 TNIP1Q15025 636 aa24.91■■□□□ 1.58
FBXO28-202ENST00000424254 ZC3H12CQ9C0D7 883 aaKnown RBP24.91■■□□□ 1.58
FBXO28-202ENST00000424254 SMC4Q9NTJ3 1288 aa24.91■■□□□ 1.58
FBXO28-202ENST00000424254 C9orf78Q9NZ63 289 aaPredicted RBP24.91■■□□□ 1.58
FBXO28-202ENST00000424254 GPRC5DQ9NZD1 345 aa24.91■■□□□ 1.58
FBXO28-202ENST00000424254 WTIPA6NIX2 430 aaPredicted RBP24.9■■□□□ 1.58
FBXO28-202ENST00000424254 ECE2O60344 883 aa24.9■■□□□ 1.58
FBXO28-202ENST00000424254 DNAJC5GQ8N7S2 189 aa24.9■■□□□ 1.58
FBXO28-202ENST00000424254 CLEC11AQ9Y240 323 aa24.9■■□□□ 1.58
FBXO28-202ENST00000424254 CT47B1P0C2W7 299 aaPredicted RBP24.89■■□□□ 1.58
FBXO28-202ENST00000424254 ATP2B4P23634 1241 aa24.89■■□□□ 1.58
FBXO28-202ENST00000424254 KCNQ5Q9NR82 932 aa24.89■■□□□ 1.58
FBXO28-202ENST00000424254 LMBR1LQ6UX01 489 aa24.88■■□□□ 1.57
FBXO28-202ENST00000424254 CHMP3Q9Y3E7 222 aa24.88■■□□□ 1.57
FBXO28-202ENST00000424254 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
FBXO28-202ENST00000424254 ANKRD18BA2A2Z9 1011 aa24.87■■□□□ 1.57
FBXO28-202ENST00000424254 PSMD14O00487 310 aa24.87■■□□□ 1.57
FBXO28-202ENST00000424254 NBPF7P0C2Y1 421 aaPredicted RBP24.87■■□□□ 1.57
FBXO28-202ENST00000424254 SUCLG2Q96I99 432 aa24.87■■□□□ 1.57
FBXO28-202ENST00000424254 ZBTB12Q9Y330 459 aaPredicted RBP24.87■■□□□ 1.57
FBXO28-202ENST00000424254 IFIT5Q13325 482 aaKnown RBP24.86■■□□□ 1.57
FBXO28-202ENST00000424254 MAP1SQ66K74 1059 aaPredicted RBP24.86■■□□□ 1.57
FBXO28-202ENST00000424254 KAZALD1Q96I82 304 aa24.86■■□□□ 1.57
FBXO28-202ENST00000424254 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
FBXO28-202ENST00000424254 UTYO14607 1347 aa24.86■■□□□ 1.57
FBXO28-202ENST00000424254 MYH3P11055 1940 aa24.86■■□□□ 1.57
FBXO28-202ENST00000424254 ITGBL1O95965 494 aaPredicted RBP24.86■■□□□ 1.57
FBXO28-202ENST00000424254 CCT4P50991 539 aaKnown RBP24.86■■□□□ 1.57
FBXO28-202ENST00000424254 USP50Q70EL3 339 aaPredicted RBP24.86■■□□□ 1.57
FBXO28-202ENST00000424254 ADARB2Q9NS39 739 aaKnown RBP24.86■■□□□ 1.57
FBXO28-202ENST00000424254 PASKQ96RG2 1323 aa24.85■■□□□ 1.57
FBXO28-202ENST00000424254 SHTN1A0MZ66 631 aa24.85■■□□□ 1.57
FBXO28-202ENST00000424254 HNRNPUQ00839 825 aaKnown RBP eCLIP24.85■■□□□ 1.57
FBXO28-202ENST00000424254 G3V3G9 751 aa24.84■■□□□ 1.57
FBXO28-202ENST00000424254 DCAF8Q5TAQ9 597 aa24.84■■□□□ 1.57
FBXO28-202ENST00000424254 CNTROBQ8N137 903 aa24.84■■□□□ 1.57
FBXO28-202ENST00000424254 RARSP54136 660 aaKnown RBP24.83■■□□□ 1.56
FBXO28-202ENST00000424254 CHRNDQ07001 517 aa24.83■■□□□ 1.56
FBXO28-202ENST00000424254 ANKRD2Q9GZV1 360 aa24.83■■□□□ 1.56
FBXO28-202ENST00000424254 CNOT7Q9UIV1 285 aaKnown RBP24.83■■□□□ 1.56
FBXO28-202ENST00000424254 NOB1Q9ULX3 412 aaKnown RBP24.83■■□□□ 1.56
FBXO28-202ENST00000424254 LEMD3Q9Y2U8 911 aa24.83■■□□□ 1.56
FBXO28-202ENST00000424254 MED23Q9ULK4 1368 aa24.82■■□□□ 1.56
FBXO28-202ENST00000424254 BRPF1P55201 1214 aaPredicted RBP24.82■■□□□ 1.56
FBXO28-202ENST00000424254 CCDC57Q2TAC2 916 aa24.82■■□□□ 1.56
FBXO28-202ENST00000424254 MICALL2Q8IY33 904 aa24.82■■□□□ 1.56
FBXO28-202ENST00000424254 DPF2Q92785 391 aa24.82■■□□□ 1.56
FBXO28-202ENST00000424254 ZNF594Q96JF6 807 aaPredicted RBP24.82■■□□□ 1.56
FBXO28-202ENST00000424254 VIL1P09327 827 aaKnown RBP24.81■■□□□ 1.56
FBXO28-202ENST00000424254 KLRK1P26718 216 aa24.81■■□□□ 1.56
FBXO28-202ENST00000424254 TXNRD3Q86VQ6 643 aa24.81■■□□□ 1.56
FBXO28-202ENST00000424254 TRPM4Q8TD43 1214 aa24.81■■□□□ 1.56
FBXO28-202ENST00000424254 KLRG1Q96E93 195 aa24.81■■□□□ 1.56
FBXO28-202ENST00000424254 USP44Q9H0E7 712 aa24.81■■□□□ 1.56
FBXO28-202ENST00000424254 RPS12P25398 132 aaKnown RBP24.8■■□□□ 1.56
FBXO28-202ENST00000424254 HIRAP54198 1017 aaPredicted RBP24.8■■□□□ 1.56
FBXO28-202ENST00000424254 BICC1Q9H694 974 aaKnown RBP24.8■■□□□ 1.56
FBXO28-202ENST00000424254 CREBZFQ9NS37 354 aa24.8■■□□□ 1.56
FBXO28-202ENST00000424254 ZNF804BA4D1E1 1349 aa24.8■■□□□ 1.56
FBXO28-202ENST00000424254 SNAP23O00161 211 aa24.79■■□□□ 1.56
FBXO28-202ENST00000424254 TAF7LQ5H9L4 462 aa24.79■■□□□ 1.56
FBXO28-202ENST00000424254 PODNQ7Z5L7 613 aa24.79■■□□□ 1.56
FBXO28-202ENST00000424254 ANKRD44Q8N8A2 993 aa24.79■■□□□ 1.56
FBXO28-202ENST00000424254 HELBQ8NG08 1087 aaPredicted RBP24.79■■□□□ 1.56
FBXO28-202ENST00000424254 SPEF2Q9C093 1822 aa24.79■■□□□ 1.56
FBXO28-202ENST00000424254 H7C1D1 291 aa24.78■■□□□ 1.56
FBXO28-202ENST00000424254 TAF5LO75529 589 aa24.78■■□□□ 1.56
FBXO28-202ENST00000424254 RABL6Q3YEC7 729 aaPredicted RBP24.78■■□□□ 1.56
FBXO28-202ENST00000424254 LDHAL6AQ6ZMR3 332 aa24.77■■□□□ 1.56
FBXO28-202ENST00000424254 API5Q9BZZ5 524 aaKnown RBP24.77■■□□□ 1.56
FBXO28-202ENST00000424254 EGFRP00533 1210 aa24.76■■□□□ 1.55
FBXO28-202ENST00000424254 KCNJ4P48050 445 aa24.76■■□□□ 1.55
FBXO28-202ENST00000424254 FMR1Q06787 632 aaKnown RBP eCLIP24.76■■□□□ 1.55
FBXO28-202ENST00000424254 SAMD7Q7Z3H4 446 aa24.76■■□□□ 1.55
FBXO28-202ENST00000424254 COA1Q9GZY4 146 aa24.76■■□□□ 1.55
FBXO28-202ENST00000424254 RSBN1LQ6PCB5 846 aaPredicted RBP24.75■■□□□ 1.55
FBXO28-202ENST00000424254 CNNM1Q9NRU3 951 aa24.75■■□□□ 1.55
FBXO28-202ENST00000424254 PGAP2Q9UHJ9 254 aa24.75■■□□□ 1.55
FBXO28-202ENST00000424254 SCN9AQ15858 1988 aa24.75■■□□□ 1.55
FBXO28-202ENST00000424254 KIF16BQ96L93 1317 aa24.74■■□□□ 1.55
FBXO28-202ENST00000424254 IRS2Q9Y4H2 1338 aa24.74■■□□□ 1.55
FBXO28-202ENST00000424254 USP17L3A6NCW0 530 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms