RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 STYK1Q6J9G0 422 aa17.31■□□□□ 0.36
ACTN4-203ENST00000424234 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
ACTN4-203ENST00000424234 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
ACTN4-203ENST00000424234 LNPKQ9C0E8 428 aa17.31■□□□□ 0.36
ACTN4-203ENST00000424234 PPP1R1BQ9UD71 204 aaPredicted RBP17.31■□□□□ 0.36
ACTN4-203ENST00000424234 DUOX1Q9NRD9 1551 aa17.31■□□□□ 0.36
ACTN4-203ENST00000424234 CHD4Q14839 1912 aa17.3■□□□□ 0.36
ACTN4-203ENST00000424234 DPEP1P16444 411 aa17.3■□□□□ 0.36
ACTN4-203ENST00000424234 TGFB2P61812 414 aa17.3■□□□□ 0.36
ACTN4-203ENST00000424234 SIL1Q9H173 461 aa17.3■□□□□ 0.36
ACTN4-203ENST00000424234 SBF1O95248 1867 aa17.3■□□□□ 0.36
ACTN4-203ENST00000424234 GOLGB1Q14789 3259 aaKnown RBP17.3■□□□□ 0.36
ACTN4-203ENST00000424234 SRCAPQ6ZRS2 3230 aa17.29■□□□□ 0.36
ACTN4-203ENST00000424234 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
ACTN4-203ENST00000424234 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
ACTN4-203ENST00000424234 FHDC1Q9C0D6 1143 aaPredicted RBP17.29■□□□□ 0.36
ACTN4-203ENST00000424234 EXOC6BQ9Y2D4 811 aa17.29■□□□□ 0.36
ACTN4-203ENST00000424234 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
ACTN4-203ENST00000424234 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 KCNA3P22001 575 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
ACTN4-203ENST00000424234 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.369e-9■□□□□ 11
ACTN4-203ENST00000424234 PUS3Q9BZE2 481 aaKnown RBP17.28■□□□□ 0.36
ACTN4-203ENST00000424234 EYA2O00167 538 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
ACTN4-203ENST00000424234 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
ACTN4-203ENST00000424234 LRRC24Q50LG9 513 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 DCTPP1Q9H773 170 aa17.28■□□□□ 0.36
ACTN4-203ENST00000424234 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 CIAO1O76071 339 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 PRPF40BQ6NWY9 871 aaKnown RBP17.27■□□□□ 0.35
ACTN4-203ENST00000424234 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 MPHOSPH8Q99549 860 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 FBXO3Q9UK99 471 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 PSME4Q14997 1843 aa17.27■□□□□ 0.35
ACTN4-203ENST00000424234 ZNF609O15014 1411 aa17.26■□□□□ 0.35
ACTN4-203ENST00000424234 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
ACTN4-203ENST00000424234 PPEF1O14829 653 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-203ENST00000424234 ALDH1B1P30837 517 aa17.26■□□□□ 0.35
ACTN4-203ENST00000424234 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
ACTN4-203ENST00000424234 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
ACTN4-203ENST00000424234 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
ACTN4-203ENST00000424234 BSDC1Q9NW68 430 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-203ENST00000424234 MYO5AQ9Y4I1 1855 aaKnown RBP17.25■□□□□ 0.35
ACTN4-203ENST00000424234 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
ACTN4-203ENST00000424234 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
ACTN4-203ENST00000424234 ZNF646O15015 1829 aaPredicted RBP17.25■□□□□ 0.35
ACTN4-203ENST00000424234 MYH7P12883 1935 aa17.24■□□□□ 0.35
ACTN4-203ENST00000424234 BBOX1O75936 387 aa17.24■□□□□ 0.35
ACTN4-203ENST00000424234 IL15P40933 162 aaPredicted RBP17.24■□□□□ 0.35
ACTN4-203ENST00000424234 G3BP1Q13283 466 aaKnown RBP eCLIP17.24■□□□□ 0.353e-10■■□□□ 13.1
ACTN4-203ENST00000424234 SASH1O94885 1247 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
ACTN4-203ENST00000424234 HSP90AB4PQ58FF6 505 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 VGLL2Q8N8G2 317 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
ACTN4-203ENST00000424234 APBB1O00213 710 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 EIF5BO60841 1220 aaKnown RBP17.23■□□□□ 0.35
ACTN4-203ENST00000424234 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 SYT17Q9BSW7 474 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
ACTN4-203ENST00000424234 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 CHRNDQ07001 517 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 RHPN1Q8TCX5 695 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 WWC3Q9ULE0 1092 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
ACTN4-203ENST00000424234 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
ACTN4-203ENST00000424234 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
ACTN4-203ENST00000424234 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
ACTN4-203ENST00000424234 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
ACTN4-203ENST00000424234 TFCP2Q12800 502 aa17.2■□□□□ 0.34
ACTN4-203ENST00000424234 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
ACTN4-203ENST00000424234 SP8Q8IXZ3 490 aa17.2■□□□□ 0.34
ACTN4-203ENST00000424234 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
ACTN4-203ENST00000424234 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
ACTN4-203ENST00000424234 SMARCA5O60264 1052 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-203ENST00000424234 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
ACTN4-203ENST00000424234 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-203ENST00000424234 XDHP47989 1333 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 TAF5LO75529 589 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 PDE8BO95263 885 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 GPSM2P81274 684 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
ACTN4-203ENST00000424234 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-203ENST00000424234 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
ACTN4-203ENST00000424234 C21orf2O43822 256 aa17.17■□□□□ 0.34
ACTN4-203ENST00000424234 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms