RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 MINPP1Q9UNW1 487 aa21.19■□□□□ 0.98
FOXN4-203ENST00000423960 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
FOXN4-203ENST00000423960 MPNDQ8N594 471 aa21.18■□□□□ 0.98
FOXN4-203ENST00000423960 CNNM1Q9NRU3 951 aa21.18■□□□□ 0.98
FOXN4-203ENST00000423960 COL4A1P02462 1669 aa21.18■□□□□ 0.98
FOXN4-203ENST00000423960 TAF1P21675 1872 aa21.18■□□□□ 0.98
FOXN4-203ENST00000423960 PNMA6EA0A0J9YXQ4 647 aa21.17■□□□□ 0.98
FOXN4-203ENST00000423960 CEP85Q6P2H3 762 aa21.17■□□□□ 0.98
FOXN4-203ENST00000423960 RPAP2Q8IXW5 612 aaPredicted RBP21.17■□□□□ 0.98
FOXN4-203ENST00000423960 KLHDC4Q8TBB5 520 aa21.17■□□□□ 0.98
FOXN4-203ENST00000423960 NSFL1CQ9UNZ2 370 aaKnown RBP21.17■□□□□ 0.98
FOXN4-203ENST00000423960 GPSM2P81274 684 aa21.16■□□□□ 0.98
FOXN4-203ENST00000423960 DPP8Q6V1X1 898 aaPredicted RBP21.16■□□□□ 0.98
FOXN4-203ENST00000423960 PUS3Q9BZE2 481 aaKnown RBP21.16■□□□□ 0.98
FOXN4-203ENST00000423960 ANKIB1Q9P2G1 1089 aa21.16■□□□□ 0.98
FOXN4-203ENST00000423960 KDM2BQ8NHM5 1336 aa21.15■□□□□ 0.98
FOXN4-203ENST00000423960 FKBP4Q02790 459 aaKnown RBP eCLIP21.15■□□□□ 0.98
FOXN4-203ENST00000423960 SSH3Q8TE77 659 aa21.15■□□□□ 0.98
FOXN4-203ENST00000423960 ANKRD2Q9GZV1 360 aa21.15■□□□□ 0.98
FOXN4-203ENST00000423960 TAOK3Q9H2K8 898 aa21.15■□□□□ 0.98
FOXN4-203ENST00000423960 COPRSQ9NQ92 184 aa21.15■□□□□ 0.98
FOXN4-203ENST00000423960 PA2G4Q9UQ80 394 aaKnown RBP21.15■□□□□ 0.98
FOXN4-203ENST00000423960 RIPOR2Q9Y4F9 1068 aa21.15■□□□□ 0.98
FOXN4-203ENST00000423960 CACNA1SQ13698 1873 aa21.14■□□□□ 0.97
FOXN4-203ENST00000423960 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.97
FOXN4-203ENST00000423960 CHRNDQ07001 517 aa21.14■□□□□ 0.97
FOXN4-203ENST00000423960 POLA2Q14181 598 aa21.14■□□□□ 0.97
FOXN4-203ENST00000423960 LRRC24Q50LG9 513 aa21.14■□□□□ 0.97
FOXN4-203ENST00000423960 PSMD1Q99460 953 aa21.14■□□□□ 0.97
FOXN4-203ENST00000423960 PODXL2Q9NZ53 605 aa21.14■□□□□ 0.97
FOXN4-203ENST00000423960 XDHP47989 1333 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 LTBP3Q9NS15 1303 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 EYA2O00167 538 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 AAMPQ13685 434 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 SUPT20HQ8NEM7 779 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 EXOC6Q8TAG9 804 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 RTFDC1Q9BY42 306 aaPredicted RBP21.13■□□□□ 0.97
FOXN4-203ENST00000423960 SIL1Q9H173 461 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 RRAGCQ9HB90 399 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 FBXO3Q9UK99 471 aa21.13■□□□□ 0.97
FOXN4-203ENST00000423960 CIAO1O76071 339 aa21.12■□□□□ 0.97
FOXN4-203ENST00000423960 HELBQ8NG08 1087 aaPredicted RBP21.12■□□□□ 0.97
FOXN4-203ENST00000423960 GGA1Q9UJY5 639 aa21.12■□□□□ 0.97
FOXN4-203ENST00000423960 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
FOXN4-203ENST00000423960 MROH5Q6ZUA9 1318 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 C6orf229H3BNL8 230 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 HMMRO75330 724 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 ATP2B4P23634 1241 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 SIRT2Q8IXJ6 389 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 TBC1D16Q8TBP0 767 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 ZNF277Q9NRM2 450 aaPredicted RBP21.11■□□□□ 0.97
FOXN4-203ENST00000423960 POLLQ9UGP5 575 aa21.11■□□□□ 0.97
FOXN4-203ENST00000423960 ZC3H4Q9UPT8 1303 aaKnown RBP21.1■□□□□ 0.97
FOXN4-203ENST00000423960 TAF5LO75529 589 aa21.1■□□□□ 0.97
FOXN4-203ENST00000423960 TOMM70O94826 608 aa21.1■□□□□ 0.97
FOXN4-203ENST00000423960 IL15P40933 162 aaPredicted RBP21.1■□□□□ 0.97
FOXN4-203ENST00000423960 G3BP1Q13283 466 aaKnown RBP eCLIP21.1■□□□□ 0.97
FOXN4-203ENST00000423960 METTL24Q5JXM2 366 aa21.1■□□□□ 0.97
FOXN4-203ENST00000423960 ATG9AQ7Z3C6 839 aa21.1■□□□□ 0.97
FOXN4-203ENST00000423960 LEMD3Q9Y2U8 911 aa21.1■□□□□ 0.97
FOXN4-203ENST00000423960 UFL1O94874 794 aa21.09■□□□□ 0.97
FOXN4-203ENST00000423960 VPS33BQ9H267 617 aa21.09■□□□□ 0.97
FOXN4-203ENST00000423960 PCDHB15Q9Y5E8 787 aa21.09■□□□□ 0.97
FOXN4-203ENST00000423960 SBF1O95248 1867 aa21.09■□□□□ 0.97
FOXN4-203ENST00000423960 GLTPD2A6NH11 291 aa21.08■□□□□ 0.97
FOXN4-203ENST00000423960 SURF6O75683 361 aaKnown RBP21.08■□□□□ 0.97
FOXN4-203ENST00000423960 KCNJ4P48050 445 aa21.08■□□□□ 0.97
FOXN4-203ENST00000423960 C16orf71Q8IYS4 520 aaPredicted RBP21.08■□□□□ 0.97
FOXN4-203ENST00000423960 EYA3Q99504 573 aa21.08■□□□□ 0.97
FOXN4-203ENST00000423960 CEP126Q9P2H0 1117 aa21.08■□□□□ 0.97
FOXN4-203ENST00000423960 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.97
FOXN4-203ENST00000423960 IARSP41252 1262 aaKnown RBP21.07■□□□□ 0.96
FOXN4-203ENST00000423960 WASHC4Q2M389 1173 aa21.07■□□□□ 0.96
FOXN4-203ENST00000423960 LRRC37AA6NMS7 1700 aa21.07■□□□□ 0.96
FOXN4-203ENST00000423960 ZNF804BA4D1E1 1349 aa21.06■□□□□ 0.96
FOXN4-203ENST00000423960 WTIPA6NIX2 430 aaPredicted RBP21.06■□□□□ 0.96
FOXN4-203ENST00000423960 PDE8BO95263 885 aa21.06■□□□□ 0.96
FOXN4-203ENST00000423960 ZC3H12CQ9C0D7 883 aaKnown RBP21.06■□□□□ 0.96
FOXN4-203ENST00000423960 FER1L6Q2WGJ9 1857 aa21.06■□□□□ 0.96
FOXN4-203ENST00000423960 SNAP23O00161 211 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 RIMBP2O15034 1052 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 PPIP5K2O43314 1243 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 HSPA6P17066 643 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 KIAA2012Q0VF49 1180 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
FOXN4-203ENST00000423960 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 AOC3Q16853 763 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 DPY19L2Q6NUT2 758 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 LARGE2Q8N3Y3 721 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 VGLL2Q8N8G2 317 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 GPR101Q96P66 508 aaPredicted RBP21.05■□□□□ 0.96
FOXN4-203ENST00000423960 SPEF2Q9C093 1822 aa21.05■□□□□ 0.96
FOXN4-203ENST00000423960 HSP90AB4PQ58FF6 505 aa21.04■□□□□ 0.96
FOXN4-203ENST00000423960 TFCP2Q12800 502 aa21.03■□□□□ 0.96
FOXN4-203ENST00000423960 RBM46Q8TBY0 533 aaKnown RBP21.03■□□□□ 0.96
FOXN4-203ENST00000423960 JDP2Q8WYK2 163 aa21.03■□□□□ 0.96
FOXN4-203ENST00000423960 EXOC6BQ9Y2D4 811 aa21.03■□□□□ 0.96
FOXN4-203ENST00000423960 TIAM2Q8IVF5 1701 aa21.03■□□□□ 0.96
FOXN4-203ENST00000423960 VEGFAP15692 232 aaPredicted RBP21.02■□□□□ 0.96
FOXN4-203ENST00000423960 PUM3Q15397 648 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms