RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 CIAPIN1Q6FI81 312 aa19.71■□□□□ 0.75
SPC24-201ENST00000423327 GPRC5DQ9NZD1 345 aa19.71■□□□□ 0.75
SPC24-201ENST00000423327 PSME4Q14997 1843 aa19.7■□□□□ 0.74
SPC24-201ENST00000423327 UFL1O94874 794 aa19.7■□□□□ 0.74
SPC24-201ENST00000423327 ITGBL1O95965 494 aaPredicted RBP19.7■□□□□ 0.74
SPC24-201ENST00000423327 PNMA8AQ86V59 439 aaPredicted RBP19.7■□□□□ 0.74
SPC24-201ENST00000423327 CDC5LQ99459 802 aaKnown RBP19.7■□□□□ 0.74
SPC24-201ENST00000423327 KCNQ5Q9NR82 932 aa19.7■□□□□ 0.74
SPC24-201ENST00000423327 ZNF646O15015 1829 aaPredicted RBP19.69■□□□□ 0.74
SPC24-201ENST00000423327 SHTN1A0MZ66 631 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 ECE2O60344 883 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 ITGA6P23229 1130 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 LMOD1P29536 600 aaPredicted RBP19.69■□□□□ 0.74
SPC24-201ENST00000423327 FOXO4P98177 505 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 DOK7Q18PE1 504 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 EPHA10Q5JZY3 1008 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 MAP1SQ66K74 1059 aaPredicted RBP19.69■□□□□ 0.74
SPC24-201ENST00000423327 SSH1Q8WYL5 1049 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 KLRG1Q96E93 195 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 BSDC1Q9NW68 430 aaPredicted RBP19.69■□□□□ 0.74
SPC24-201ENST00000423327 ANKIB1Q9P2G1 1089 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 GGA1Q9UJY5 639 aa19.69■□□□□ 0.74
SPC24-201ENST00000423327 PSMD14O00487 310 aa19.68■□□□□ 0.74
SPC24-201ENST00000423327 EYA3Q99504 573 aa19.68■□□□□ 0.74
SPC24-201ENST00000423327 MINPP1Q9UNW1 487 aa19.68■□□□□ 0.74
SPC24-201ENST00000423327 XDHP47989 1333 aa19.68■□□□□ 0.74
SPC24-201ENST00000423327 MIER1Q8N108 512 aa19.67■□□□□ 0.74
SPC24-201ENST00000423327 BCL2L13Q9BXK5 485 aa19.67■□□□□ 0.74
SPC24-201ENST00000423327 ZBTB12Q9Y330 459 aaPredicted RBP19.67■□□□□ 0.74
SPC24-201ENST00000423327 GRM8O00222 908 aa19.66■□□□□ 0.74
SPC24-201ENST00000423327 TNIP1Q15025 636 aa19.66■□□□□ 0.74
SPC24-201ENST00000423327 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
SPC24-201ENST00000423327 CLEC11AQ9Y240 323 aa19.66■□□□□ 0.74
SPC24-201ENST00000423327 PCNTO95613 3336 aa19.65■□□□□ 0.74
SPC24-201ENST00000423327 ALDH1L1O75891 902 aa19.65■□□□□ 0.74
SPC24-201ENST00000423327 FMR1Q06787 632 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPC24-201ENST00000423327 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
SPC24-201ENST00000423327 CNTROBQ8N137 903 aa19.65■□□□□ 0.74
SPC24-201ENST00000423327 JMYQ8N9B5 988 aa19.65■□□□□ 0.74
SPC24-201ENST00000423327 TRPM4Q8TD43 1214 aa19.65■□□□□ 0.74
SPC24-201ENST00000423327 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
SPC24-201ENST00000423327 ATP2B4P23634 1241 aa19.64■□□□□ 0.73
SPC24-201ENST00000423327 HIRAP54198 1017 aaPredicted RBP19.64■□□□□ 0.73
SPC24-201ENST00000423327 KAZALD1Q96I82 304 aa19.64■□□□□ 0.73
SPC24-201ENST00000423327 ZC3H12CQ9C0D7 883 aaKnown RBP19.64■□□□□ 0.73
SPC24-201ENST00000423327 SRCIN1Q9C0H9 1055 aa19.64■□□□□ 0.73
SPC24-201ENST00000423327 CREBZFQ9NS37 354 aa19.64■□□□□ 0.73
SPC24-201ENST00000423327 MED23Q9ULK4 1368 aa19.64■□□□□ 0.73
SPC24-201ENST00000423327 IGHMBP2P38935 993 aaKnown RBP19.63■□□□□ 0.73
SPC24-201ENST00000423327 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
SPC24-201ENST00000423327 MICALL2Q8IY33 904 aa19.63■□□□□ 0.73
SPC24-201ENST00000423327 SUCLG2Q96I99 432 aa19.63■□□□□ 0.73
SPC24-201ENST00000423327 ZNF609O15014 1411 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 UTYO14607 1347 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 PTPRCP08575 1304 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 EGFRP00533 1210 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 NBPF7P0C2Y1 421 aaPredicted RBP19.62■□□□□ 0.73
SPC24-201ENST00000423327 KLRK1P26718 216 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 CCT4P50991 539 aaKnown RBP19.62■□□□□ 0.73
SPC24-201ENST00000423327 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 LMBR1LQ6UX01 489 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 TXNRD3Q86VQ6 643 aa19.62■□□□□ 0.73
SPC24-201ENST00000423327 CNOT7Q9UIV1 285 aaKnown RBP19.62■□□□□ 0.73
SPC24-201ENST00000423327 TRPM7Q96QT4 1865 aa19.61■□□□□ 0.73
SPC24-201ENST00000423327 VIL1P09327 827 aaKnown RBP19.61■□□□□ 0.73
SPC24-201ENST00000423327 DPF2Q92785 391 aa19.61■□□□□ 0.73
SPC24-201ENST00000423327 IRS2Q9Y4H2 1338 aa19.6■□□□□ 0.73
SPC24-201ENST00000423327 ANKRD18BA2A2Z9 1011 aa19.6■□□□□ 0.73
SPC24-201ENST00000423327 CHRNDQ07001 517 aa19.6■□□□□ 0.73
SPC24-201ENST00000423327 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
SPC24-201ENST00000423327 PGAP2Q9UHJ9 254 aa19.6■□□□□ 0.73
SPC24-201ENST00000423327 SNAP23O00161 211 aa19.59■□□□□ 0.73
SPC24-201ENST00000423327 TRAF5O00463 557 aa19.59■□□□□ 0.73
SPC24-201ENST00000423327 SAMD7Q7Z3H4 446 aa19.59■□□□□ 0.73
SPC24-201ENST00000423327 ZNF594Q96JF6 807 aaPredicted RBP19.59■□□□□ 0.73
SPC24-201ENST00000423327 MPHOSPH8Q99549 860 aa19.59■□□□□ 0.73
SPC24-201ENST00000423327 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
SPC24-201ENST00000423327 MKRN1Q9UHC7 482 aaKnown RBP19.59■□□□□ 0.73
SPC24-201ENST00000423327 CNTNAP1P78357 1384 aa19.58■□□□□ 0.73
SPC24-201ENST00000423327 TMEM88BA6NKF7 163 aa19.58■□□□□ 0.72
SPC24-201ENST00000423327 RPS12P25398 132 aaKnown RBP19.58■□□□□ 0.72
SPC24-201ENST00000423327 IFIT5Q13325 482 aaKnown RBP19.58■□□□□ 0.72
SPC24-201ENST00000423327 CHMP3Q9Y3E7 222 aa19.58■□□□□ 0.72
SPC24-201ENST00000423327 ZNF804BA4D1E1 1349 aa19.57■□□□□ 0.72
SPC24-201ENST00000423327 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
SPC24-201ENST00000423327 ANKRD44Q8N8A2 993 aa19.57■□□□□ 0.72
SPC24-201ENST00000423327 GMLQ99445 158 aa19.57■□□□□ 0.72
SPC24-201ENST00000423327 LEMD3Q9Y2U8 911 aa19.57■□□□□ 0.72
SPC24-201ENST00000423327 POLR2AP24928 1970 aaKnown RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 H7C1D1 291 aa19.56■□□□□ 0.72
SPC24-201ENST00000423327 TAF5LO75529 589 aa19.56■□□□□ 0.72
SPC24-201ENST00000423327 RABL6Q3YEC7 729 aaPredicted RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 TBC1D10BQ4KMP7 808 aaPredicted RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 RSBN1LQ6PCB5 846 aaPredicted RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 PODNQ7Z5L7 613 aa19.56■□□□□ 0.72
SPC24-201ENST00000423327 HELBQ8NG08 1087 aaPredicted RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 ANKRD2Q9GZV1 360 aa19.56■□□□□ 0.72
SPC24-201ENST00000423327 BICC1Q9H694 974 aaKnown RBP19.56■□□□□ 0.72
SPC24-201ENST00000423327 G3V3G9 751 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms