RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 KCNB2Q92953 911 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 TM6SF1Q9BZW5 370 aa10.83□□□□□ -0.68
SNX20-203ENST00000423026 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
SNX20-203ENST00000423026 UBN2Q6ZU65 1347 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 GOLIM4O00461 696 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 PSMA5P28066 241 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 CUL4AQ13619 759 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 MCMDC2Q4G0Z9 681 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 SUSD4Q5VX71 490 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
SNX20-203ENST00000423026 CYP46A1Q9Y6A2 500 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 MED23Q9ULK4 1368 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 CASTP20810 708 aaKnown RBP10.82□□□□□ -0.68
SNX20-203ENST00000423026 CREB3L3Q68CJ9 461 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 NOL8Q76FK4 1167 aaKnown RBP10.82□□□□□ -0.68
SNX20-203ENST00000423026 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 JAKMIP1Q96N16 626 aaKnown RBP10.82□□□□□ -0.68
SNX20-203ENST00000423026 NIP7Q9Y221 180 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX20-203ENST00000423026 RIPOR2Q9Y4F9 1068 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 NDUFB9Q9Y6M9 179 aa10.82□□□□□ -0.68
SNX20-203ENST00000423026 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
SNX20-203ENST00000423026 ATP2B3Q16720 1220 aa10.81□□□□□ -0.68
SNX20-203ENST00000423026 CLEC4GQ6UXB4 293 aa10.81□□□□□ -0.68
SNX20-203ENST00000423026 ZGPATQ8N5A5 531 aaKnown RBP10.81□□□□□ -0.68
SNX20-203ENST00000423026 HELLSQ9NRZ9 838 aa10.81□□□□□ -0.68
SNX20-203ENST00000423026 HMG20BQ9P0W2 317 aa10.81□□□□□ -0.68
SNX20-203ENST00000423026 ISY1Q9ULR0 285 aaKnown RBP10.81□□□□□ -0.68
SNX20-203ENST00000423026 COL5A3P25940 1745 aaPredicted RBP10.81□□□□□ -0.68
SNX20-203ENST00000423026 FAM177BA6PVY3 158 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 TAF5LO75529 589 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNX20-203ENST00000423026 SSFA2P28290 1259 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 VPS53Q5VIR6 699 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 PDRG1Q9NUG6 133 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 LIMCH1Q9UPQ0 1083 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 SLC27A2O14975 620 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 FKBP4Q02790 459 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNX20-203ENST00000423026 KRT32Q14532 448 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
SNX20-203ENST00000423026 TTC14Q96N46 770 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
SNX20-203ENST00000423026 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
SNX20-203ENST00000423026 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
SNX20-203ENST00000423026 AK2P54819 239 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 CCDC152Q4G0S7 254 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 CLEC17AQ6ZS10 378 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 RUFY3Q7L099 469 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 LINC00116Q8NCU8 138 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 GJD4Q96KN9 370 aaPredicted RBP10.79□□□□□ -0.68
SNX20-203ENST00000423026 MPHOSPH8Q99549 860 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 ABCC12Q96J65 1359 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 RGL2O15211 777 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 RNF113AO15541 343 aaKnown RBP10.79□□□□□ -0.68
SNX20-203ENST00000423026 TRAK2O60296 914 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 PDE8BO95263 885 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 ADORA1P30542 326 aa10.79□□□□□ -0.68
SNX20-203ENST00000423026 RC3H1Q5TC82 1133 aaKnown RBP10.79□□□□□ -0.68
SNX20-203ENST00000423026 ZSCAN31Q96LW9 406 aaPredicted RBP10.79□□□□□ -0.68
SNX20-203ENST00000423026 ZFYP08048 801 aaPredicted RBP10.78□□□□□ -0.68
SNX20-203ENST00000423026 MRE11P49959 708 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 SKOR2Q2VWA4 1001 aaPredicted RBP10.78□□□□□ -0.68
SNX20-203ENST00000423026 ADCK5Q3MIX3 580 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 TSGA10IPQ3SY00 556 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 BLOC1S2Q6QNY1 142 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.78□□□□□ -0.68
SNX20-203ENST00000423026 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
SNX20-203ENST00000423026 NTSR2O95665 410 aa10.77□□□□□ -0.68
SNX20-203ENST00000423026 CYP2E1P05181 493 aaPredicted RBP10.77□□□□□ -0.68
SNX20-203ENST00000423026 IGHMBP2P38935 993 aaKnown RBP10.77□□□□□ -0.68
SNX20-203ENST00000423026 ANKRD1Q15327 319 aa10.77□□□□□ -0.68
SNX20-203ENST00000423026 ZMYM1Q5SVZ6 1142 aa10.77□□□□□ -0.68
SNX20-203ENST00000423026 SH2B1Q9NRF2 756 aaPredicted RBP10.77□□□□□ -0.68
SNX20-203ENST00000423026 TRPC5Q9UL62 973 aaPredicted RBP10.77□□□□□ -0.68
SNX20-203ENST00000423026 AFF2P51816 1311 aa10.77□□□□□ -0.68
SNX20-203ENST00000423026 BTAF1O14981 1849 aa10.77□□□□□ -0.69
SNX20-203ENST00000423026 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.69
SNX20-203ENST00000423026 PUM3Q15397 648 aaKnown RBP10.77□□□□□ -0.69
SNX20-203ENST00000423026 CCDC129Q6ZRS4 1044 aa10.77□□□□□ -0.69
SNX20-203ENST00000423026 VGLL2Q8N8G2 317 aa10.77□□□□□ -0.69
SNX20-203ENST00000423026 LPIN2Q92539 896 aa10.77□□□□□ -0.69
SNX20-203ENST00000423026 ZNF512BQ96KM6 892 aaPredicted RBP10.77□□□□□ -0.69
SNX20-203ENST00000423026 SEC62Q99442 399 aaKnown RBP10.77□□□□□ -0.69
SNX20-203ENST00000423026 NHSQ6T4R5 1651 aa10.77□□□□□ -0.69
SNX20-203ENST00000423026 BCORQ6W2J9 1755 aa10.77□□□□□ -0.69
SNX20-203ENST00000423026 RPS6KA4O75676 772 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 UQCRFS1P1P0C7P4 283 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 SLC5A1P13866 664 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 CPA1P15085 419 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
SNX20-203ENST00000423026 TTF1Q15361 905 aaPredicted RBP10.76□□□□□ -0.69
SNX20-203ENST00000423026 ZSCAN25Q6NSZ9 544 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 RTL9Q8NET4 1388 aa10.76□□□□□ -0.69
SNX20-203ENST00000423026 DSCC1Q9BVC3 393 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms