RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 RTL9Q8NET4 1388 aa12.59□□□□□ -0.39
NF1-203ENST00000422121 RARSP54136 660 aaKnown RBP12.59□□□□□ -0.39
NF1-203ENST00000422121 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
NF1-203ENST00000422121 AOC3Q16853 763 aa12.59□□□□□ -0.39
NF1-203ENST00000422121 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
NF1-203ENST00000422121 DPP8Q6V1X1 898 aaPredicted RBP12.59□□□□□ -0.39
NF1-203ENST00000422121 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
NF1-203ENST00000422121 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
NF1-203ENST00000422121 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
NF1-203ENST00000422121 GABBR2O75899 941 aa12.58□□□□□ -0.4
NF1-203ENST00000422121 CT47B1P0C2W7 299 aaPredicted RBP12.58□□□□□ -0.4
NF1-203ENST00000422121 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
NF1-203ENST00000422121 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
NF1-203ENST00000422121 NUBP1P53384 320 aa12.58□□□□□ -0.4
NF1-203ENST00000422121 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
NF1-203ENST00000422121 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
NF1-203ENST00000422121 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
NF1-203ENST00000422121 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
NF1-203ENST00000422121 UTYO14607 1347 aa12.58□□□□□ -0.4
NF1-203ENST00000422121 PTPRCP08575 1304 aa12.58□□□□□ -0.4
NF1-203ENST00000422121 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 GRM8O00222 908 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 TOMM70O94826 608 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 VEGFAP15692 232 aaPredicted RBP12.57□□□□□ -0.4
NF1-203ENST00000422121 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
NF1-203ENST00000422121 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
NF1-203ENST00000422121 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
NF1-203ENST00000422121 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
NF1-203ENST00000422121 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
NF1-203ENST00000422121 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
NF1-203ENST00000422121 KCNQ5Q9NR82 932 aa12.56□□□□□ -0.4
NF1-203ENST00000422121 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
NF1-203ENST00000422121 BCAR3O75815 825 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 ITGA6P23229 1130 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 CXCL9Q07325 125 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 SUCLG2Q96I99 432 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 BSDC1Q9NW68 430 aaPredicted RBP12.55□□□□□ -0.4
NF1-203ENST00000422121 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
NF1-203ENST00000422121 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
NF1-203ENST00000422121 MYH3P11055 1940 aa12.54□□□□□ -0.4
NF1-203ENST00000422121 PCNTO95613 3336 aa12.54□□□□□ -0.4
NF1-203ENST00000422121 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
NF1-203ENST00000422121 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
NF1-203ENST00000422121 GPC2Q8N158 579 aa12.54□□□□□ -0.4
NF1-203ENST00000422121 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
NF1-203ENST00000422121 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
NF1-203ENST00000422121 SCNN1DP51172 638 aa12.53□□□□□ -0.4
NF1-203ENST00000422121 WASHC4Q2M389 1173 aa12.53□□□□□ -0.4
NF1-203ENST00000422121 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
NF1-203ENST00000422121 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
NF1-203ENST00000422121 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
NF1-203ENST00000422121 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
NF1-203ENST00000422121 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
NF1-203ENST00000422121 TAF1DQ9H5J8 278 aaPredicted RBP12.53□□□□□ -0.4
NF1-203ENST00000422121 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
NF1-203ENST00000422121 C6orf229H3BNL8 230 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 SNAP23O00161 211 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 TXNRD3Q86VQ6 643 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.41
NF1-203ENST00000422121 RAD17O75943 681 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 UFL1O94874 794 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 EIF6P56537 245 aaKnown RBP12.51□□□□□ -0.41
NF1-203ENST00000422121 GSE1Q14687 1217 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
NF1-203ENST00000422121 GGA1Q9UJY5 639 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 XDHP47989 1333 aa12.51□□□□□ -0.41
NF1-203ENST00000422121 SHTN1A0MZ66 631 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 ANKRD18BA2A2Z9 1011 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 TRIM27P14373 513 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 KLRK1P26718 216 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 EPS15P42566 896 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
NF1-203ENST00000422121 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 SPEF2Q9C093 1822 aa12.5□□□□□ -0.41
NF1-203ENST00000422121 SCN9AQ15858 1988 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 SCN4AP35499 1836 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 ECE2O60344 883 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 TAF5LO75529 589 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 HSPA6P17066 643 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms