RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 FAM227BQ96M60 508 aa22.76■■□□□ 1.23
RBFOX1-204ENST00000422070 PAG1Q9NWQ8 432 aa22.76■■□□□ 1.23
RBFOX1-204ENST00000422070 CHMP5Q9NZZ3 219 aa22.76■■□□□ 1.23
RBFOX1-204ENST00000422070 CIZ1Q9ULV3 898 aaPredicted RBP22.76■■□□□ 1.23
RBFOX1-204ENST00000422070 A0A0D9SFI3 127 aa22.75■■□□□ 1.23
RBFOX1-204ENST00000422070 SLC10A5Q5PT55 438 aa22.75■■□□□ 1.23
RBFOX1-204ENST00000422070 ZNF772Q68DY9 489 aaPredicted RBP22.75■■□□□ 1.23
RBFOX1-204ENST00000422070 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
RBFOX1-204ENST00000422070 IFIT1P09914 478 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 ADRA2BP18089 450 aa22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 SLC27A3Q5K4L6 730 aa22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 NYXQ9GZU5 481 aa22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 ZPR1O75312 459 aa22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 SF3B3Q15393 1217 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 MAP4K1Q92918 833 aa22.74■■□□□ 1.23
RBFOX1-204ENST00000422070 NEK4P51957 841 aa22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 PTH1RQ03431 593 aa22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 NECTIN1Q15223 517 aa22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 PUM3Q15397 648 aaKnown RBP22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 TTC39AQ5SRH9 613 aa22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 TBC1D9BQ66K14 1250 aa22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 SNX14Q9Y5W7 946 aa22.72■■□□□ 1.23
RBFOX1-204ENST00000422070 FAM177BA6PVY3 158 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 FGFR2P21802 821 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 ADORA1P30542 326 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 NFKBIBQ15653 356 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 LRRFIP1Q32MZ4 808 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 GORABQ5T7V8 394 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 GOLIM4O00461 696 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 NBR1Q14596 966 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 LPIN2Q92539 896 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 ARHGEF1Q92888 912 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 CDC5LQ99459 802 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 MPHOSPH8Q99549 860 aa22.71■■□□□ 1.23
RBFOX1-204ENST00000422070 CASZ1Q86V15 1759 aa22.7■■□□□ 1.22
RBFOX1-204ENST00000422070 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
RBFOX1-204ENST00000422070 SETDB2Q96T68 719 aa22.7■■□□□ 1.22
RBFOX1-204ENST00000422070 TM6SF1Q9BZW5 370 aa22.7■■□□□ 1.22
RBFOX1-204ENST00000422070 HELLSQ9NRZ9 838 aa22.7■■□□□ 1.22
RBFOX1-204ENST00000422070 UBR3Q6ZT12 1888 aa22.69■■□□□ 1.22
RBFOX1-204ENST00000422070 HSP90AA1P07900 732 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-204ENST00000422070 MCMDC2Q4G0Z9 681 aa22.69■■□□□ 1.22
RBFOX1-204ENST00000422070 TRAPPC3LQ5T215 181 aa22.69■■□□□ 1.22
RBFOX1-204ENST00000422070 LRRC4BQ9NT99 713 aa22.69■■□□□ 1.22
RBFOX1-204ENST00000422070 NDUFB9Q9Y6M9 179 aa22.69■■□□□ 1.22
RBFOX1-204ENST00000422070 TAF5LO75529 589 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 SPRYD3Q8NCJ5 442 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 SEC31BQ9NQW1 1179 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 SRP68Q9UHB9 627 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 RBM8AQ9Y5S9 174 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 ZFYP08048 801 aaPredicted RBP22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 SSFA2P28290 1259 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 ZNF589Q86UQ0 364 aaPredicted RBP22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 RASEFQ8IZ41 740 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 HMG20BQ9P0W2 317 aa22.68■■□□□ 1.22
RBFOX1-204ENST00000422070 ZKSCAN1P17029 563 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-204ENST00000422070 ARID4AP29374 1257 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-204ENST00000422070 ZMYM1Q5SVZ6 1142 aa22.67■■□□□ 1.22
RBFOX1-204ENST00000422070 RNF20Q5VTR2 975 aa22.67■■□□□ 1.22
RBFOX1-204ENST00000422070 UQCRFS1P1P0C7P4 283 aa22.66■■□□□ 1.22
RBFOX1-204ENST00000422070 SLC5A1P13866 664 aa22.66■■□□□ 1.22
RBFOX1-204ENST00000422070 RFC4P35249 363 aa22.66■■□□□ 1.22
RBFOX1-204ENST00000422070 TSGA10IPQ3SY00 556 aa22.66■■□□□ 1.22
RBFOX1-204ENST00000422070 TPTE2Q6XPS3 522 aa22.66■■□□□ 1.22
RBFOX1-204ENST00000422070 AKAP11Q9UKA4 1901 aa22.66■■□□□ 1.22
RBFOX1-204ENST00000422070 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 NBPF5PQ86XG9 351 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 CWC22Q9HCG8 908 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 A0A1B0GUL6 1792 aa22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 CARMIL3Q8ND23 1372 aa22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 RPAP1Q9BWH6 1393 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 RNF113AO15541 343 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 PRPF40BQ6NWY9 871 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 TTC14Q96N46 770 aa22.65■■□□□ 1.22
RBFOX1-204ENST00000422070 GTF2E1P29083 439 aaPredicted RBP22.64■■□□□ 1.21
RBFOX1-204ENST00000422070 CUL4AQ13619 759 aa22.64■■□□□ 1.21
RBFOX1-204ENST00000422070 SCARF1Q14162 830 aa22.64■■□□□ 1.21
RBFOX1-204ENST00000422070 TTF1Q15361 905 aaPredicted RBP22.64■■□□□ 1.21
RBFOX1-204ENST00000422070 BICDL1Q6ZP65 573 aa22.64■■□□□ 1.21
RBFOX1-204ENST00000422070 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
RBFOX1-204ENST00000422070 MCAMP43121 646 aa22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 KCNJ4P48050 445 aa22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 FKBP4Q02790 459 aaKnown RBP eCLIP22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 CCDC102BQ68D86 513 aa22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 ANKRD18AQ8IVF6 992 aa22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 UPF3BQ9BZI7 483 aaKnown RBP22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 ZSWIM6Q9HCJ5 1215 aa22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 BSDC1Q9NW68 430 aaPredicted RBP22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 U3KPZ7 1027 aaPredicted RBP22.63■■□□□ 1.21
RBFOX1-204ENST00000422070 SLC27A2O14975 620 aa22.62■■□□□ 1.21
RBFOX1-204ENST00000422070 TRIM37O94972 964 aa22.62■■□□□ 1.21
RBFOX1-204ENST00000422070 INTS4Q96HW7 963 aaKnown RBP22.62■■□□□ 1.21
RBFOX1-204ENST00000422070 TMX3Q96JJ7 454 aa22.62■■□□□ 1.21
RBFOX1-204ENST00000422070 NLRP3Q96P20 1036 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms