RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 C9orf78Q9NZ63 289 aaPredicted RBP22.3■■□□□ 1.16
TNFAIP3-203ENST00000421450 CHMP3Q9Y3E7 222 aa22.3■■□□□ 1.16
TNFAIP3-203ENST00000421450 EPS15P42566 896 aa22.29■■□□□ 1.16
TNFAIP3-203ENST00000421450 SCNN1DP51172 638 aa22.29■■□□□ 1.16
TNFAIP3-203ENST00000421450 DOK7Q18PE1 504 aa22.29■■□□□ 1.16
TNFAIP3-203ENST00000421450 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
TNFAIP3-203ENST00000421450 XDHP47989 1333 aa22.29■■□□□ 1.16
TNFAIP3-203ENST00000421450 ITGA6P23229 1130 aa22.28■■□□□ 1.16
TNFAIP3-203ENST00000421450 CASP7P55210 303 aa22.28■■□□□ 1.16
TNFAIP3-203ENST00000421450 BSDC1Q9NW68 430 aaPredicted RBP22.28■■□□□ 1.16
TNFAIP3-203ENST00000421450 RTL9Q8NET4 1388 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 YDJCA8MPS7 323 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 ECE2O60344 883 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 ALDH1L1O75891 902 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 GMPSP49915 693 aaPredicted RBP22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 FAM161AQ3B820 660 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 SSH1Q8WYL5 1049 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 MPHOSPH8Q99549 860 aa22.27■■□□□ 1.16
TNFAIP3-203ENST00000421450 GRM8O00222 908 aa22.26■■□□□ 1.15
TNFAIP3-203ENST00000421450 ATP2B4P23634 1241 aa22.26■■□□□ 1.15
TNFAIP3-203ENST00000421450 GPRC5DQ9NZD1 345 aa22.26■■□□□ 1.15
TNFAIP3-203ENST00000421450 ANKRD18BA2A2Z9 1011 aa22.25■■□□□ 1.15
TNFAIP3-203ENST00000421450 CSF1RP07333 972 aa22.25■■□□□ 1.15
TNFAIP3-203ENST00000421450 SMC4Q9NTJ3 1288 aa22.25■■□□□ 1.15
TNFAIP3-203ENST00000421450 MINPP1Q9UNW1 487 aa22.25■■□□□ 1.15
TNFAIP3-203ENST00000421450 PTPRCP08575 1304 aa22.25■■□□□ 1.15
TNFAIP3-203ENST00000421450 ALDH1L2Q3SY69 923 aa22.24■■□□□ 1.15
TNFAIP3-203ENST00000421450 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
TNFAIP3-203ENST00000421450 USP50Q70EL3 339 aaPredicted RBP22.24■■□□□ 1.15
TNFAIP3-203ENST00000421450 ADARB2Q9NS39 739 aaKnown RBP22.24■■□□□ 1.15
TNFAIP3-203ENST00000421450 LTBP1Q14766 1721 aa22.23■■□□□ 1.15
TNFAIP3-203ENST00000421450 PSMD14O00487 310 aa22.23■■□□□ 1.15
TNFAIP3-203ENST00000421450 IFIT5Q13325 482 aaKnown RBP22.23■■□□□ 1.15
TNFAIP3-203ENST00000421450 TRMT2AQ8IZ69 625 aaKnown RBP22.23■■□□□ 1.15
TNFAIP3-203ENST00000421450 CNTROBQ8N137 903 aa22.23■■□□□ 1.15
TNFAIP3-203ENST00000421450 DNAJC5GQ8N7S2 189 aa22.23■■□□□ 1.15
TNFAIP3-203ENST00000421450 H7C1D1 291 aa22.22■■□□□ 1.15
TNFAIP3-203ENST00000421450 FOXO4P98177 505 aa22.22■■□□□ 1.15
TNFAIP3-203ENST00000421450 LMBR1LQ6UX01 489 aa22.22■■□□□ 1.15
TNFAIP3-203ENST00000421450 KLRG1Q96E93 195 aa22.22■■□□□ 1.15
TNFAIP3-203ENST00000421450 CNOT7Q9UIV1 285 aaKnown RBP22.22■■□□□ 1.15
TNFAIP3-203ENST00000421450 ZBTB12Q9Y330 459 aaPredicted RBP22.22■■□□□ 1.15
TNFAIP3-203ENST00000421450 CT47B1P0C2W7 299 aaPredicted RBP22.21■■□□□ 1.15
TNFAIP3-203ENST00000421450 CCT4P50991 539 aaKnown RBP22.21■■□□□ 1.15
TNFAIP3-203ENST00000421450 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
TNFAIP3-203ENST00000421450 ANKRD2Q9GZV1 360 aa22.21■■□□□ 1.15
TNFAIP3-203ENST00000421450 KCNQ5Q9NR82 932 aa22.21■■□□□ 1.15
TNFAIP3-203ENST00000421450 CEP350Q5VT06 3117 aa22.2■■□□□ 1.14
TNFAIP3-203ENST00000421450 KCNJ4P48050 445 aa22.2■■□□□ 1.14
TNFAIP3-203ENST00000421450 CCDC57Q2TAC2 916 aa22.2■■□□□ 1.14
TNFAIP3-203ENST00000421450 ITGBL1O95965 494 aaPredicted RBP22.19■■□□□ 1.14
TNFAIP3-203ENST00000421450 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
TNFAIP3-203ENST00000421450 MICALL2Q8IY33 904 aa22.19■■□□□ 1.14
TNFAIP3-203ENST00000421450 LEMD3Q9Y2U8 911 aa22.19■■□□□ 1.14
TNFAIP3-203ENST00000421450 ADAMTSL1Q8N6G6 1762 aa22.19■■□□□ 1.14
TNFAIP3-203ENST00000421450 PASKQ96RG2 1323 aa22.18■■□□□ 1.14
TNFAIP3-203ENST00000421450 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
TNFAIP3-203ENST00000421450 DPF2Q92785 391 aa22.18■■□□□ 1.14
TNFAIP3-203ENST00000421450 CREBZFQ9NS37 354 aa22.18■■□□□ 1.14
TNFAIP3-203ENST00000421450 WTIPA6NIX2 430 aaPredicted RBP22.17■■□□□ 1.14
TNFAIP3-203ENST00000421450 NBPF7P0C2Y1 421 aaPredicted RBP22.17■■□□□ 1.14
TNFAIP3-203ENST00000421450 RPS12P25398 132 aaKnown RBP22.17■■□□□ 1.14
TNFAIP3-203ENST00000421450 CHRNDQ07001 517 aa22.17■■□□□ 1.14
TNFAIP3-203ENST00000421450 SUCLG2Q96I99 432 aa22.17■■□□□ 1.14
TNFAIP3-203ENST00000421450 MED23Q9ULK4 1368 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 ZNF804BA4D1E1 1349 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 SHTN1A0MZ66 631 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 TMEM88BA6NKF7 163 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 PODNQ7Z5L7 613 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 FBXW7Q969H0 707 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 ZNF594Q96JF6 807 aaPredicted RBP22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 CNNM1Q9NRU3 951 aa22.16■■□□□ 1.14
TNFAIP3-203ENST00000421450 RBM26Q5T8P6 1007 aaKnown RBP22.15■■□□□ 1.14
TNFAIP3-203ENST00000421450 LDHAL6AQ6ZMR3 332 aa22.15■■□□□ 1.14
TNFAIP3-203ENST00000421450 HELBQ8NG08 1087 aaPredicted RBP22.15■■□□□ 1.14
TNFAIP3-203ENST00000421450 TRPM4Q8TD43 1214 aa22.15■■□□□ 1.14
TNFAIP3-203ENST00000421450 MKRN1Q9UHC7 482 aaKnown RBP22.15■■□□□ 1.14
TNFAIP3-203ENST00000421450 NOB1Q9ULX3 412 aaKnown RBP22.15■■□□□ 1.14
TNFAIP3-203ENST00000421450 SCN9AQ15858 1988 aa22.14■■□□□ 1.14
TNFAIP3-203ENST00000421450 PLIN1O60240 522 aa22.14■■□□□ 1.13
TNFAIP3-203ENST00000421450 VIL1P09327 827 aaKnown RBP22.14■■□□□ 1.13
TNFAIP3-203ENST00000421450 TBC1D10BQ4KMP7 808 aaPredicted RBP22.14■■□□□ 1.13
TNFAIP3-203ENST00000421450 SAMD7Q7Z3H4 446 aa22.14■■□□□ 1.13
TNFAIP3-203ENST00000421450 USP17L3A6NCW0 530 aa22.13■■□□□ 1.13
TNFAIP3-203ENST00000421450 USP17L4A6NCW7 530 aa22.13■■□□□ 1.13
TNFAIP3-203ENST00000421450 TAF5LO75529 589 aa22.13■■□□□ 1.13
TNFAIP3-203ENST00000421450 RSBN1LQ6PCB5 846 aaPredicted RBP22.13■■□□□ 1.13
TNFAIP3-203ENST00000421450 USP17L1Q7RTZ2 530 aa22.13■■□□□ 1.13
TNFAIP3-203ENST00000421450 UTYO14607 1347 aa22.12■■□□□ 1.13
TNFAIP3-203ENST00000421450 HIRAP54198 1017 aaPredicted RBP22.12■■□□□ 1.13
TNFAIP3-203ENST00000421450 API5Q9BZZ5 524 aaKnown RBP22.12■■□□□ 1.13
TNFAIP3-203ENST00000421450 COA1Q9GZY4 146 aa22.12■■□□□ 1.13
TNFAIP3-203ENST00000421450 BICC1Q9H694 974 aaKnown RBP22.12■■□□□ 1.13
TNFAIP3-203ENST00000421450 RARSP54136 660 aaKnown RBP22.11■■□□□ 1.13
TNFAIP3-203ENST00000421450 TXNRD3Q86VQ6 643 aa22.11■■□□□ 1.13
TNFAIP3-203ENST00000421450 AGBL3Q8NEM8 1001 aa22.11■■□□□ 1.13
TNFAIP3-203ENST00000421450 ZC3H15Q8WU90 426 aaKnown RBP22.11■■□□□ 1.13
TNFAIP3-203ENST00000421450 ABT1Q9ULW3 272 aaKnown RBP22.11■■□□□ 1.13
TNFAIP3-203ENST00000421450 TRAF5O00463 557 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms