RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 LAMB2P55268 1798 aa12.16□□□□□ -0.46
SCRN1-204ENST00000421434 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
SCRN1-204ENST00000421434 TRIM28Q13263 835 aaKnown RBP12.16□□□□□ -0.46
SCRN1-204ENST00000421434 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
SCRN1-204ENST00000421434 DCPSQ96C86 337 aaKnown RBP12.16□□□□□ -0.46
SCRN1-204ENST00000421434 ANKIB1Q9P2G1 1089 aa12.16□□□□□ -0.46
SCRN1-204ENST00000421434 ANKRD36CQ5JPF3 1778 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 ADM5C9JUS6 153 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 APAF1O14727 1248 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 CA12O43570 354 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 MYD88Q99836 296 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 RTL9Q8NET4 1388 aa12.15□□□□□ -0.46
SCRN1-204ENST00000421434 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
SCRN1-204ENST00000421434 UFL1O94874 794 aa12.14□□□□□ -0.47
SCRN1-204ENST00000421434 VIL1P09327 827 aaKnown RBP12.14□□□□□ -0.47
SCRN1-204ENST00000421434 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
SCRN1-204ENST00000421434 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
SCRN1-204ENST00000421434 NOGQ13253 232 aa12.14□□□□□ -0.47
SCRN1-204ENST00000421434 C2orf69Q8N8R5 385 aa12.14□□□□□ -0.47
SCRN1-204ENST00000421434 MCOLN1Q9GZU1 580 aa12.14□□□□□ -0.47
SCRN1-204ENST00000421434 GBA2Q9HCG7 927 aaPredicted RBP12.14□□□□□ -0.47
SCRN1-204ENST00000421434 ASTN2O75129 1339 aaPredicted RBP12.13□□□□□ -0.47
SCRN1-204ENST00000421434 COL4A1P02462 1669 aa12.13□□□□□ -0.47
SCRN1-204ENST00000421434 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
SCRN1-204ENST00000421434 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
SCRN1-204ENST00000421434 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
SCRN1-204ENST00000421434 C8orf58Q8NAV2 365 aa12.13□□□□□ -0.47
SCRN1-204ENST00000421434 GGA1Q9UJY5 639 aa12.13□□□□□ -0.47
SCRN1-204ENST00000421434 PDE8AO60658 829 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-204ENST00000421434 MLLT1Q03111 559 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-204ENST00000421434 DGKZQ13574 1117 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
SCRN1-204ENST00000421434 GGA3Q9NZ52 723 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 CASP8AP2Q9UKL3 1982 aa12.12□□□□□ -0.47
SCRN1-204ENST00000421434 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 WTIPA6NIX2 430 aaPredicted RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 HSP90B1P14625 803 aaKnown RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 GNAI1P63096 354 aa12.11□□□□□ -0.47
SCRN1-204ENST00000421434 SCARF1Q14162 830 aa12.11□□□□□ -0.47
SCRN1-204ENST00000421434 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
SCRN1-204ENST00000421434 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 SCAF8Q9UPN6 1271 aaKnown RBP12.11□□□□□ -0.47
SCRN1-204ENST00000421434 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
SCRN1-204ENST00000421434 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
SCRN1-204ENST00000421434 TRPA1O75762 1119 aa12.1□□□□□ -0.47
SCRN1-204ENST00000421434 CALD1Q05682 793 aaKnown RBP12.1□□□□□ -0.47
SCRN1-204ENST00000421434 ANGEL2Q5VTE6 544 aaKnown RBP12.1□□□□□ -0.47
SCRN1-204ENST00000421434 CCDC30Q5VVM6 783 aa12.1□□□□□ -0.47
SCRN1-204ENST00000421434 RSBN1LQ6PCB5 846 aaPredicted RBP12.1□□□□□ -0.47
SCRN1-204ENST00000421434 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
SCRN1-204ENST00000421434 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
SCRN1-204ENST00000421434 CDCA5Q96FF9 252 aa12.1□□□□□ -0.47
SCRN1-204ENST00000421434 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
SCRN1-204ENST00000421434 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
SCRN1-204ENST00000421434 RGS19P49795 217 aa12.09□□□□□ -0.47
SCRN1-204ENST00000421434 ZNF280AP59817 542 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-204ENST00000421434 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
SCRN1-204ENST00000421434 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
SCRN1-204ENST00000421434 XDHP47989 1333 aa12.09□□□□□ -0.47
SCRN1-204ENST00000421434 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.47
SCRN1-204ENST00000421434 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 AGBL3Q8NEM8 1001 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 MXD3Q9BW11 206 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
SCRN1-204ENST00000421434 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 CTSWP56202 376 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 MOB2Q70IA6 237 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 TSR2Q969E8 191 aaKnown RBP12.07□□□□□ -0.48
SCRN1-204ENST00000421434 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 GMLQ99445 158 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
SCRN1-204ENST00000421434 MINPP1Q9UNW1 487 aa12.07□□□□□ -0.48
SCRN1-204ENST00000421434 SLC10A3P09131 477 aa12.06□□□□□ -0.48
SCRN1-204ENST00000421434 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
SCRN1-204ENST00000421434 TTLL11Q8NHH1 800 aa12.06□□□□□ -0.48
SCRN1-204ENST00000421434 CHMP4AQ9BY43 222 aa12.06□□□□□ -0.48
SCRN1-204ENST00000421434 GREM2Q9H772 168 aa12.06□□□□□ -0.48
SCRN1-204ENST00000421434 SAGE1Q9NXZ1 904 aa12.06□□□□□ -0.48
SCRN1-204ENST00000421434 SCN9AQ15858 1988 aa12.06□□□□□ -0.48
SCRN1-204ENST00000421434 UBE2Q2LH0YL09 131 aa12.05□□□□□ -0.48
SCRN1-204ENST00000421434 NEXNQ0ZGT2 675 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms