RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 DEFB132Q7Z7B7 95 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 PUS3Q9BZE2 481 aaKnown RBP21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 SALL3Q9BXA9 1300 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 PDE1AP54750 535 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 NUCB2P80303 420 aa21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 ANP32BQ92688 251 aaKnown RBP21.96■■□□□ 1.11
PPFIA3-202ENST00000421230 MX1P20591 662 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 ATG9AQ7Z3C6 839 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 COL23A1Q86Y22 540 aaPredicted RBP21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 COL24A1Q17RW2 1714 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 TFCP2Q12800 502 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 HS1BP3Q53T59 392 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 TAF7LQ5H9L4 462 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 KIAA1211Q6ZU35 1233 aa21.95■■□□□ 1.1
PPFIA3-202ENST00000421230 ZMYND15Q9H091 742 aa21.94■■□□□ 1.1
PPFIA3-202ENST00000421230 TTC22Q5TAA0 569 aa21.94■■□□□ 1.1
PPFIA3-202ENST00000421230 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
PPFIA3-202ENST00000421230 NYXQ9GZU5 481 aa21.94■■□□□ 1.1
PPFIA3-202ENST00000421230 LMBRD1Q9NUN5 540 aa21.94■■□□□ 1.1
PPFIA3-202ENST00000421230 ABCC12Q96J65 1359 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 LAMB2P55268 1798 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 ANKRD18BA2A2Z9 1011 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 EYA2O00167 538 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 TERF1P54274 439 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 AACSQ86V21 672 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 EAF2Q96CJ1 260 aaPredicted RBP21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 USP26Q9BXU7 913 aa21.93■■□□□ 1.1
PPFIA3-202ENST00000421230 TPTE2Q6XPS3 522 aa21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 BAG6P46379 1132 aa21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 CARMIL3Q8ND23 1372 aa21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 CCDC8Q9H0W5 538 aaPredicted RBP21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 PDCL3Q9H2J4 239 aa21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 SEC31BQ9NQW1 1179 aa21.92■■□□□ 1.1
PPFIA3-202ENST00000421230 NPHP1O15259 732 aa21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 HSP90B1P14625 803 aaKnown RBP21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 MCTP1Q6DN14 999 aa21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 PNPLA7Q6ZV29 1317 aa21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 IFIT2P09913 472 aaKnown RBP21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 IL15P40933 162 aaPredicted RBP21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 ZSCAN23Q3MJ62 389 aa21.91■■□□□ 1.1
PPFIA3-202ENST00000421230 CCDC152Q4G0S7 254 aa21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 SLC10A5Q5PT55 438 aa21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 CWC22Q9HCG8 908 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 TLR7Q9NYK1 1049 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 STAP2Q9UGK3 403 aa21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 CIAO1O76071 339 aa21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 LDHAL6AQ6ZMR3 332 aa21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 PDLIM2Q96JY6 352 aa21.9■■□□□ 1.1
PPFIA3-202ENST00000421230 MSNP26038 577 aaKnown RBP21.89■■□□□ 1.09
PPFIA3-202ENST00000421230 TM4SF1P30408 202 aa21.89■■□□□ 1.09
PPFIA3-202ENST00000421230 CASZ1Q86V15 1759 aa21.89■■□□□ 1.09
PPFIA3-202ENST00000421230 TNNI3KQ59H18 835 aa21.88■■□□□ 1.09
PPFIA3-202ENST00000421230 FPGT-TNNI3KV9GXZ4 949 aa21.88■■□□□ 1.09
PPFIA3-202ENST00000421230 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
PPFIA3-202ENST00000421230 CAVIN1Q6NZI2 390 aaKnown RBP21.88■■□□□ 1.09
PPFIA3-202ENST00000421230 FLAD1Q8NFF5 587 aa21.88■■□□□ 1.09
PPFIA3-202ENST00000421230 DDR1Q08345 913 aa21.87■■□□□ 1.09
PPFIA3-202ENST00000421230 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
PPFIA3-202ENST00000421230 RBSNQ9H1K0 784 aa21.87■■□□□ 1.09
PPFIA3-202ENST00000421230 CNNM1Q9NRU3 951 aa21.87■■□□□ 1.09
PPFIA3-202ENST00000421230 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
PPFIA3-202ENST00000421230 NOL7Q9UMY1 257 aaKnown RBP21.87■■□□□ 1.09
PPFIA3-202ENST00000421230 SERPINB2P05120 415 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 SDSP20132 328 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 SF3B3Q15393 1217 aaKnown RBP21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 PI4K2BQ8TCG2 481 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 NLRP3Q96P20 1036 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 RIPOR2Q9Y4F9 1068 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 TAF1P21675 1872 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 COL4A1P02462 1669 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 ZNF500O60304 480 aaPredicted RBP21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 PKP1Q13835 747 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 PRR5LQ6MZQ0 368 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 CEP126Q9P2H0 1117 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 FBXO3Q9UK99 471 aa21.86■■□□□ 1.09
PPFIA3-202ENST00000421230 TIMM10P62072 90 aa21.85■■□□□ 1.09
PPFIA3-202ENST00000421230 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
PPFIA3-202ENST00000421230 RTL9Q8NET4 1388 aa21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 POLRMTO00411 1230 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 MAP4K4O95819 1239 aaPredicted RBP21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 DBNLQ9UJU6 430 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 SPEF2Q9C093 1822 aa21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 METTL24Q5JXM2 366 aa21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 NEUROD6Q96NK8 337 aa21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 ECHDC1Q9NTX5 307 aa21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 AOX1Q06278 1338 aa21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 TNRC6CQ9HCJ0 1690 aaKnown RBP21.84■■□□□ 1.09
PPFIA3-202ENST00000421230 NCLP19338 710 aaKnown RBP21.83■■□□□ 1.09
PPFIA3-202ENST00000421230 NLGN1Q8N2Q7 840 aa21.83■■□□□ 1.09
PPFIA3-202ENST00000421230 MPHOSPH8Q99549 860 aa21.83■■□□□ 1.09
PPFIA3-202ENST00000421230 DBNDD2Q9BQY9 259 aa21.83■■□□□ 1.09
PPFIA3-202ENST00000421230 ZDHHC9Q9Y397 364 aa21.83■■□□□ 1.09
PPFIA3-202ENST00000421230 RIC1Q4ADV7 1423 aa21.83■■□□□ 1.09
PPFIA3-202ENST00000421230 TTC41PQ6P2S7 1318 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms