RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ECE2O60344 883 aa22.31■■□□□ 1.16
MSH6-203ENST00000420813 RPS12P25398 132 aaKnown RBP22.31■■□□□ 1.16
MSH6-203ENST00000420813 ECE1P42892 770 aa22.31■■□□□ 1.16
MSH6-203ENST00000420813 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
MSH6-203ENST00000420813 HIRAP54198 1017 aaPredicted RBP22.31■■□□□ 1.16
MSH6-203ENST00000420813 MICALL2Q8IY33 904 aa22.31■■□□□ 1.16
MSH6-203ENST00000420813 TRPM4Q8TD43 1214 aa22.31■■□□□ 1.16
MSH6-203ENST00000420813 ZC3H12CQ9C0D7 883 aaKnown RBP22.31■■□□□ 1.16
MSH6-203ENST00000420813 TLL2Q9Y6L7 1015 aa22.31■■□□□ 1.16
MSH6-203ENST00000420813 IGKV5-2P06315 115 aa22.3■■□□□ 1.16
MSH6-203ENST00000420813 MAP2K1Q02750 393 aaPredicted RBP22.3■■□□□ 1.16
MSH6-203ENST00000420813 NEXNQ0ZGT2 675 aa22.3■■□□□ 1.16
MSH6-203ENST00000420813 MRS2Q9HD23 443 aa22.3■■□□□ 1.16
MSH6-203ENST00000420813 ZBTB12Q9Y330 459 aaPredicted RBP22.3■■□□□ 1.16
MSH6-203ENST00000420813 CDC37L1Q7L3B6 337 aa22.29■■□□□ 1.16
MSH6-203ENST00000420813 ANKRD18AQ8IVF6 992 aa22.29■■□□□ 1.16
MSH6-203ENST00000420813 JARID2Q92833 1246 aaPredicted RBP22.29■■□□□ 1.16
MSH6-203ENST00000420813 CAPNS2Q96L46 248 aa22.29■■□□□ 1.16
MSH6-203ENST00000420813 GLIS2Q9BZE0 524 aaPredicted RBP22.29■■□□□ 1.16
MSH6-203ENST00000420813 ANKIB1Q9P2G1 1089 aa22.29■■□□□ 1.16
MSH6-203ENST00000420813 GGA1Q9UJY5 639 aa22.29■■□□□ 1.16
MSH6-203ENST00000420813 RTL9Q8NET4 1388 aa22.28■■□□□ 1.16
MSH6-203ENST00000420813 SHTN1A0MZ66 631 aa22.28■■□□□ 1.16
MSH6-203ENST00000420813 UFL1O94874 794 aa22.28■■□□□ 1.16
MSH6-203ENST00000420813 DOK7Q18PE1 504 aa22.28■■□□□ 1.16
MSH6-203ENST00000420813 ZNF609O15014 1411 aa22.27■■□□□ 1.16
MSH6-203ENST00000420813 ANP32CO43423 234 aa22.27■■□□□ 1.16
MSH6-203ENST00000420813 CELF2O95319 508 aaKnown RBP22.27■■□□□ 1.16
MSH6-203ENST00000420813 CTSWP56202 376 aa22.27■■□□□ 1.16
MSH6-203ENST00000420813 GPR101Q96P66 508 aaPredicted RBP22.27■■□□□ 1.16
MSH6-203ENST00000420813 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
MSH6-203ENST00000420813 XDHP47989 1333 aa22.27■■□□□ 1.16
MSH6-203ENST00000420813 NEURL1BA8MQ27 555 aa22.26■■□□□ 1.15
MSH6-203ENST00000420813 SLC4A2P04920 1241 aa22.26■■□□□ 1.15
MSH6-203ENST00000420813 SAPCD2Q86UD0 394 aa22.26■■□□□ 1.15
MSH6-203ENST00000420813 HHIPL1Q96JK4 782 aa22.26■■□□□ 1.15
MSH6-203ENST00000420813 CCDC85AQ96PX6 553 aaPredicted RBP22.26■■□□□ 1.15
MSH6-203ENST00000420813 VIL1P09327 827 aaKnown RBP22.25■■□□□ 1.15
MSH6-203ENST00000420813 CYP4F22Q6NT55 531 aa22.25■■□□□ 1.15
MSH6-203ENST00000420813 PAXIP1Q6ZW49 1069 aaPredicted RBP22.25■■□□□ 1.15
MSH6-203ENST00000420813 G2E3Q7L622 706 aa22.25■■□□□ 1.15
MSH6-203ENST00000420813 SAMD7Q7Z3H4 446 aa22.25■■□□□ 1.15
MSH6-203ENST00000420813 TTLL11Q8NHH1 800 aa22.25■■□□□ 1.15
MSH6-203ENST00000420813 KCNQ5Q9NR82 932 aa22.25■■□□□ 1.15
MSH6-203ENST00000420813 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
MSH6-203ENST00000420813 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
MSH6-203ENST00000420813 G3V3G9 751 aa22.24■■□□□ 1.15
MSH6-203ENST00000420813 CWF19L2Q2TBE0 894 aaKnown RBP22.24■■□□□ 1.15
MSH6-203ENST00000420813 DCAF8Q5TAQ9 597 aa22.24■■□□□ 1.15
MSH6-203ENST00000420813 WDR63Q8IWG1 891 aa22.24■■□□□ 1.15
MSH6-203ENST00000420813 H7C1W4 665 aa22.23■■□□□ 1.15
MSH6-203ENST00000420813 ATP2B4P23634 1241 aa22.23■■□□□ 1.15
MSH6-203ENST00000420813 FLIIQ13045 1269 aa22.23■■□□□ 1.15
MSH6-203ENST00000420813 TBC1D10BQ4KMP7 808 aaPredicted RBP22.23■■□□□ 1.15
MSH6-203ENST00000420813 CAPN15O75808 1086 aa22.22■■□□□ 1.15
MSH6-203ENST00000420813 HSPA8P11142 646 aaKnown RBP22.22■■□□□ 1.15
MSH6-203ENST00000420813 MAP2K2P36507 400 aa22.22■■□□□ 1.15
MSH6-203ENST00000420813 LBX1P52954 281 aa22.22■■□□□ 1.15
MSH6-203ENST00000420813 GREM2Q9H772 168 aa22.22■■□□□ 1.15
MSH6-203ENST00000420813 BSDC1Q9NW68 430 aaPredicted RBP22.22■■□□□ 1.15
MSH6-203ENST00000420813 EGFRP00533 1210 aa22.21■■□□□ 1.15
MSH6-203ENST00000420813 UBE3BQ7Z3V4 1068 aa22.21■■□□□ 1.15
MSH6-203ENST00000420813 USP48Q86UV5 1035 aa22.21■■□□□ 1.15
MSH6-203ENST00000420813 AGBL3Q8NEM8 1001 aa22.21■■□□□ 1.15
MSH6-203ENST00000420813 PLA2G12BQ9BX93 195 aa22.21■■□□□ 1.15
MSH6-203ENST00000420813 ZNF408Q9H9D4 720 aa22.21■■□□□ 1.15
MSH6-203ENST00000420813 ZNF646O15015 1829 aaPredicted RBP22.2■■□□□ 1.14
MSH6-203ENST00000420813 GRM1Q13255 1194 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.14
MSH6-203ENST00000420813 GCKRQ14397 625 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 KIF4BQ2VIQ3 1234 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 PODNQ7Z5L7 613 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 BEGAINQ9BUH8 593 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 MYH16Q9H6N6 1097 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 MED23Q9ULK4 1368 aa22.2■■□□□ 1.14
MSH6-203ENST00000420813 VAMP4O75379 141 aa22.19■■□□□ 1.14
MSH6-203ENST00000420813 RSBN1LQ6PCB5 846 aaPredicted RBP22.19■■□□□ 1.14
MSH6-203ENST00000420813 KRT26Q7Z3Y9 468 aa22.19■■□□□ 1.14
MSH6-203ENST00000420813 LINS1Q8NG48 757 aa22.19■■□□□ 1.14
MSH6-203ENST00000420813 DNAAF4Q8WXU2 420 aa22.19■■□□□ 1.14
MSH6-203ENST00000420813 DCPSQ96C86 337 aaKnown RBP22.19■■□□□ 1.14
MSH6-203ENST00000420813 MINPP1Q9UNW1 487 aa22.19■■□□□ 1.14
MSH6-203ENST00000420813 ZNF280AP59817 542 aaPredicted RBP22.18■■□□□ 1.14
MSH6-203ENST00000420813 RBM26Q5T8P6 1007 aaKnown RBP22.18■■□□□ 1.14
MSH6-203ENST00000420813 CASP7P55210 303 aa22.17■■□□□ 1.14
MSH6-203ENST00000420813 AOC2O75106 756 aa22.16■■□□□ 1.14
MSH6-203ENST00000420813 IGHMBP2P38935 993 aaKnown RBP22.16■■□□□ 1.14
MSH6-203ENST00000420813 CCT4P50991 539 aaKnown RBP22.16■■□□□ 1.14
MSH6-203ENST00000420813 EXOSC9Q06265 439 aaKnown RBP22.16■■□□□ 1.14
MSH6-203ENST00000420813 GMLQ99445 158 aa22.16■■□□□ 1.14
MSH6-203ENST00000420813 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
MSH6-203ENST00000420813 USP17L3A6NCW0 530 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 USP17L4A6NCW7 530 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 CSF1RP07333 972 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 BRPF1P55201 1214 aaPredicted RBP22.15■■□□□ 1.14
MSH6-203ENST00000420813 USP17L1Q7RTZ2 530 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 GGA3Q9NZ52 723 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 LEMD3Q9Y2U8 911 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 A0A1B0GUL6 1792 aa22.15■■□□□ 1.14
MSH6-203ENST00000420813 ADM5C9JUS6 153 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms