RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
TNFAIP3-202ENST00000420009 KRT26Q7Z3Y9 468 aa13.4□□□□□ -0.26
TNFAIP3-202ENST00000420009 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
TNFAIP3-202ENST00000420009 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
TNFAIP3-202ENST00000420009 ADM5C9JUS6 153 aa13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 RPS12P25398 132 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 TBC1D10BQ4KMP7 808 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 GBA2Q9HCG7 927 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-202ENST00000420009 RIPK4P57078 832 aa13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 CELF1Q92879 486 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 CCDC102AQ96A19 550 aa13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 ZNF609O15014 1411 aa13.38□□□□□ -0.27
TNFAIP3-202ENST00000420009 ECE2O60344 883 aa13.37□□□□□ -0.27
TNFAIP3-202ENST00000420009 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-202ENST00000420009 C2orf69Q8N8R5 385 aa13.37□□□□□ -0.27
TNFAIP3-202ENST00000420009 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
TNFAIP3-202ENST00000420009 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
TNFAIP3-202ENST00000420009 SLC10A3P09131 477 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 GPSM2P81274 684 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 GGA3Q9NZ52 723 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
TNFAIP3-202ENST00000420009 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 ZNF157P51786 506 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 ZNF428Q96B54 188 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 EYA3Q99504 573 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 PDE4DIPQ5VU43 2346 aa13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 ASTN2O75129 1339 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-202ENST00000420009 CHL1O00533 1208 aa13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 TRPA1O75762 1119 aa13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 VIL1P09327 827 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 SOX10P56693 466 aa13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
TNFAIP3-202ENST00000420009 PAPPA2Q9BXP8 1791 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 ATP5J2-PTCD1G3V325 749 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 HOXB7P09629 217 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 TRIM28Q13263 835 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 CDCA5Q96FF9 252 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 PODXL2Q9NZ53 605 aa13.33□□□□□ -0.28
TNFAIP3-202ENST00000420009 POLR2AP24928 1970 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-202ENST00000420009 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-202ENST00000420009 LHX8Q68G74 356 aa13.32□□□□□ -0.28
TNFAIP3-202ENST00000420009 CTU1Q7Z7A3 348 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-202ENST00000420009 RASAL3Q86YV0 1011 aa13.32□□□□□ -0.28
TNFAIP3-202ENST00000420009 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-202ENST00000420009 ZC3H12CQ9C0D7 883 aaKnown RBP13.31□□□□□ -0.28
TNFAIP3-202ENST00000420009 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-202ENST00000420009 PSME4Q14997 1843 aa13.31□□□□□ -0.28
TNFAIP3-202ENST00000420009 AKAP11Q9UKA4 1901 aa13.31□□□□□ -0.28
TNFAIP3-202ENST00000420009 UFL1O94874 794 aa13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 FKBP1BP68106 108 aa13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 RTL5Q5HYW3 569 aaPredicted RBP13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 ANGEL2Q5VTE6 544 aaKnown RBP13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 AGBL3Q8NEM8 1001 aa13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 GMLQ99445 158 aa13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
TNFAIP3-202ENST00000420009 PRPF38BQ5VTL8 546 aaKnown RBP13.29□□□□□ -0.28
TNFAIP3-202ENST00000420009 ZBTB38Q8NAP3 1195 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP3-202ENST00000420009 SEC31BQ9NQW1 1179 aa13.29□□□□□ -0.28
TNFAIP3-202ENST00000420009 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
TNFAIP3-202ENST00000420009 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
TNFAIP3-202ENST00000420009 SCARF1Q14162 830 aa13.28□□□□□ -0.28
TNFAIP3-202ENST00000420009 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
TNFAIP3-202ENST00000420009 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
TNFAIP3-202ENST00000420009 CCDC146Q8IYE0 955 aa13.27□□□□□ -0.29
TNFAIP3-202ENST00000420009 MYOZ2Q9NPC6 264 aa13.27□□□□□ -0.29
TNFAIP3-202ENST00000420009 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
TNFAIP3-202ENST00000420009 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.29
TNFAIP3-202ENST00000420009 G3V3G9 751 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 ZNF646O15015 1829 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 USP17L8P0C7I0 530 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 XDHP47989 1333 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 RALBP1Q15311 655 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 PKN2Q16513 984 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms