RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 PTPRCP08575 1304 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 ACEP12821 1306 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 AFF2P51816 1311 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 SIAH2O43255 324 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 HMGN5P82970 282 aaKnown RBP8.51□□□□□ -1.05
TVP23C-202ENST00000419890 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 PRIMPOLQ96LW4 560 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 CABP1Q9NZU7 370 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 NXF1Q9UBU9 619 aaKnown RBP8.51□□□□□ -1.05
TVP23C-202ENST00000419890 RGS12O14924 1447 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 CACNA1FO60840 1977 aa8.51□□□□□ -1.05
TVP23C-202ENST00000419890 AK9Q5TCS8 1911 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 SBNO1A3KN83 1393 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 RTL1A6NKG5 1358 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 SOCS7O14512 581 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 RGPD1P0DJD0 1748 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 GTF2F1P35269 517 aaKnown RBP eCLIP8.5□□□□□ -1.05
TVP23C-202ENST00000419890 GMPRP36959 345 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 CUL4AQ13619 759 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 MCTP1Q6DN14 999 aa8.5□□□□□ -1.05
TVP23C-202ENST00000419890 CAVIN1Q6NZI2 390 aaKnown RBP8.5□□□□□ -1.05
TVP23C-202ENST00000419890 QTRT2Q9H974 415 aaKnown RBP8.5□□□□□ -1.05
TVP23C-202ENST00000419890 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 HOXA2O43364 376 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 HMMRO75330 724 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
TVP23C-202ENST00000419890 BRD1O95696 1058 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 ALDH1A1P00352 501 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 UQCRHP07919 91 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 TWISTNBQ3B726 338 aaPredicted RBP8.49□□□□□ -1.05
TVP23C-202ENST00000419890 UTP14CQ5TAP6 766 aaKnown RBP8.49□□□□□ -1.05
TVP23C-202ENST00000419890 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
TVP23C-202ENST00000419890 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 TMEM87AQ8NBN3 555 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 RBSNQ9H1K0 784 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 USP21Q9UK80 565 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 PXDNLA1KZ92 1463 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 AOX1Q06278 1338 aa8.49□□□□□ -1.05
TVP23C-202ENST00000419890 LRRC37A3O60309 1634 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 COL22A1Q8NFW1 1626 aaPredicted RBP8.48□□□□□ -1.05
TVP23C-202ENST00000419890 ERC2O15083 957 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 BMP1P13497 986 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 JUNDP17535 347 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 MCCP23508 829 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 RXRBP28702 533 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 USP46P62068 366 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 GUCA2AQ02747 115 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 KIAA2012Q0VF49 1180 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
TVP23C-202ENST00000419890 FAM208AQ9UK61 1670 aaKnown RBP8.47□□□□□ -1.05
TVP23C-202ENST00000419890 CRYBG1Q9Y4K1 1723 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 TPM3P06753 285 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
TVP23C-202ENST00000419890 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 MYRIPQ8NFW9 859 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 GPT2Q8TD30 523 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 SYMPKQ92797 1274 aaKnown RBP8.47□□□□□ -1.05
TVP23C-202ENST00000419890 TSPY26PQ9H489 355 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 MBIPQ9NS73 344 aa8.47□□□□□ -1.05
TVP23C-202ENST00000419890 R3HCC1Q9Y3T6 440 aaKnown RBP8.47□□□□□ -1.05
TVP23C-202ENST00000419890 SOS1Q07889 1333 aaPredicted RBP8.47□□□□□ -1.05
TVP23C-202ENST00000419890 PDIA4P13667 645 aaKnown RBP8.46□□□□□ -1.06
TVP23C-202ENST00000419890 IL13P35225 146 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 CEP85Q6P2H3 762 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 PIBF1Q8WXW3 757 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 TMEM63CQ9P1W3 806 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 POLKQ9UBT6 870 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 ZDHHC9Q9Y397 364 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 TOPAZ1Q8N9V7 1692 aa8.46□□□□□ -1.06
TVP23C-202ENST00000419890 LOC100996750A0A140TA64 210 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 FAM83GA6ND36 823 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 H3BM21 787 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 SDSP20132 328 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 RBM6P78332 1123 aaKnown RBP8.45□□□□□ -1.06
TVP23C-202ENST00000419890 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 ZSCAN1Q8NBB4 408 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 CCDC94Q9BW85 323 aaPredicted RBP8.45□□□□□ -1.06
TVP23C-202ENST00000419890 KRTAP4-6Q9BYQ5 205 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 PRDM4Q9UKN5 801 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 TRPC5Q9UL62 973 aaPredicted RBP8.45□□□□□ -1.06
TVP23C-202ENST00000419890 SALL3Q9BXA9 1300 aa8.45□□□□□ -1.06
TVP23C-202ENST00000419890 TRPM3Q9HCF6 1732 aaPredicted RBP8.45□□□□□ -1.06
TVP23C-202ENST00000419890 CAPN5O15484 640 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-202ENST00000419890 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
TVP23C-202ENST00000419890 NCLP19338 710 aaKnown RBP8.44□□□□□ -1.06
TVP23C-202ENST00000419890 VEGFBP49765 207 aa8.44□□□□□ -1.06
TVP23C-202ENST00000419890 ZC3H6P61129 1189 aaKnown RBP8.44□□□□□ -1.06
TVP23C-202ENST00000419890 MDM2Q00987 491 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-202ENST00000419890 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
TVP23C-202ENST00000419890 IRF7Q92985 503 aa8.44□□□□□ -1.06
TVP23C-202ENST00000419890 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
TVP23C-202ENST00000419890 SPTLC3Q9NUV7 552 aa8.44□□□□□ -1.06
TVP23C-202ENST00000419890 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms