RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 ANKRD18BA2A2Z9 1011 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 GRM8O00222 908 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 EPS15P42566 896 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 HTRA3P83110 453 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 BSDC1Q9NW68 430 aaPredicted RBP12.23□□□□□ -0.45
CTSA-205ENST00000419493 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
CTSA-205ENST00000419493 PTPRCP08575 1304 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 ECE2O60344 883 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 ATP2B4P23634 1241 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 CASP7P55210 303 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTSA-205ENST00000419493 IFIT5Q13325 482 aaKnown RBP12.22□□□□□ -0.45
CTSA-205ENST00000419493 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 ALDH1L2Q3SY69 923 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 SCN4AP35499 1836 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 COL4A1P02462 1669 aa12.22□□□□□ -0.45
CTSA-205ENST00000419493 YDJCA8MPS7 323 aa12.21□□□□□ -0.45
CTSA-205ENST00000419493 CSF1RP07333 972 aa12.21□□□□□ -0.45
CTSA-205ENST00000419493 CT47B1P0C2W7 299 aaPredicted RBP12.21□□□□□ -0.45
CTSA-205ENST00000419493 GMPSP49915 693 aaPredicted RBP12.21□□□□□ -0.45
CTSA-205ENST00000419493 SCNN1DP51172 638 aa12.21□□□□□ -0.45
CTSA-205ENST00000419493 TAF7LQ5H9L4 462 aa12.21□□□□□ -0.45
CTSA-205ENST00000419493 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
CTSA-205ENST00000419493 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.45
CTSA-205ENST00000419493 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.45
CTSA-205ENST00000419493 MYH3P11055 1940 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 H7C1D1 291 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 PSMD14O00487 310 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 KCNJ4P48050 445 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 FOXO4P98177 505 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
CTSA-205ENST00000419493 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
CTSA-205ENST00000419493 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 KCNQ5Q9NR82 932 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
CTSA-205ENST00000419493 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
CTSA-205ENST00000419493 RTL9Q8NET4 1388 aa12.19□□□□□ -0.46
CTSA-205ENST00000419493 DUOX1Q9NRD9 1551 aa12.19□□□□□ -0.46
CTSA-205ENST00000419493 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
CTSA-205ENST00000419493 CCT4P50991 539 aaKnown RBP12.19□□□□□ -0.46
CTSA-205ENST00000419493 ANKRD2Q9GZV1 360 aa12.19□□□□□ -0.46
CTSA-205ENST00000419493 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
CTSA-205ENST00000419493 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
CTSA-205ENST00000419493 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
CTSA-205ENST00000419493 PLIN1O60240 522 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 CHRNDQ07001 517 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 EPHA10Q5JZY3 1008 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 SUCLG2Q96I99 432 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 ZNF594Q96JF6 807 aaPredicted RBP12.18□□□□□ -0.46
CTSA-205ENST00000419493 CNNM1Q9NRU3 951 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
CTSA-205ENST00000419493 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
CTSA-205ENST00000419493 TAF5LO75529 589 aa12.17□□□□□ -0.46
CTSA-205ENST00000419493 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
CTSA-205ENST00000419493 PODNQ7Z5L7 613 aa12.17□□□□□ -0.46
CTSA-205ENST00000419493 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
CTSA-205ENST00000419493 DNAJC5GQ8N7S2 189 aa12.17□□□□□ -0.46
CTSA-205ENST00000419493 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
CTSA-205ENST00000419493 DPF2Q92785 391 aa12.17□□□□□ -0.46
CTSA-205ENST00000419493 SPEF2Q9C093 1822 aa12.16□□□□□ -0.46
CTSA-205ENST00000419493 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
CTSA-205ENST00000419493 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
CTSA-205ENST00000419493 RPS12P25398 132 aaKnown RBP12.16□□□□□ -0.46
CTSA-205ENST00000419493 RARSP54136 660 aaKnown RBP12.16□□□□□ -0.46
CTSA-205ENST00000419493 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
CTSA-205ENST00000419493 API5Q9BZZ5 524 aaKnown RBP12.16□□□□□ -0.46
CTSA-205ENST00000419493 LTBP1Q14766 1721 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 VIL1P09327 827 aaKnown RBP12.15□□□□□ -0.46
CTSA-205ENST00000419493 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 FRAT1Q92837 279 aaPredicted RBP12.15□□□□□ -0.46
CTSA-205ENST00000419493 USP44Q9H0E7 712 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 BICC1Q9H694 974 aaKnown RBP12.15□□□□□ -0.46
CTSA-205ENST00000419493 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
CTSA-205ENST00000419493 UTYO14607 1347 aa12.14□□□□□ -0.47
CTSA-205ENST00000419493 PASKQ96RG2 1323 aa12.14□□□□□ -0.47
CTSA-205ENST00000419493 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
CTSA-205ENST00000419493 TBC1D10BQ4KMP7 808 aaPredicted RBP12.14□□□□□ -0.47
CTSA-205ENST00000419493 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
CTSA-205ENST00000419493 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
CTSA-205ENST00000419493 TRPM4Q8TD43 1214 aa12.14□□□□□ -0.47
CTSA-205ENST00000419493 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
CTSA-205ENST00000419493 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
CTSA-205ENST00000419493 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
CTSA-205ENST00000419493 SNAP23O00161 211 aa12.13□□□□□ -0.47
CTSA-205ENST00000419493 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
CTSA-205ENST00000419493 UBTFL1P0CB47 393 aaPredicted RBP12.13□□□□□ -0.47
CTSA-205ENST00000419493 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
CTSA-205ENST00000419493 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms