RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 MTFR1LQ9H019 292 aa15.7■□□□□ 0.1
LINC00642-201ENST00000419459 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
LINC00642-201ENST00000419459 ANKRD18BA2A2Z9 1011 aa15.68■□□□□ 0.1
LINC00642-201ENST00000419459 SF3B3Q15393 1217 aaKnown RBP15.68■□□□□ 0.1
LINC00642-201ENST00000419459 CELF1Q92879 486 aaKnown RBP15.68■□□□□ 0.1
LINC00642-201ENST00000419459 PKNOX2Q96KN3 472 aa15.68■□□□□ 0.1
LINC00642-201ENST00000419459 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
LINC00642-201ENST00000419459 SASH1O94885 1247 aa15.68■□□□□ 0.1
LINC00642-201ENST00000419459 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
LINC00642-201ENST00000419459 LDHAL6AQ6ZMR3 332 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 C16orf71Q8IYS4 520 aaPredicted RBP15.67■□□□□ 0.1
LINC00642-201ENST00000419459 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 GRPEL1Q9HAV7 217 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 NUCB1Q02818 461 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 G3BP1Q13283 466 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00642-201ENST00000419459 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 OTUD7AQ8TE49 926 aaPredicted RBP15.67■□□□□ 0.1
LINC00642-201ENST00000419459 BRIP1Q9BX63 1249 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 LRRCC1Q9C099 1032 aa15.67■□□□□ 0.1
LINC00642-201ENST00000419459 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
LINC00642-201ENST00000419459 CHRNA5P30532 468 aa15.66■□□□□ 0.1
LINC00642-201ENST00000419459 CHD1LQ86WJ1 897 aa15.66■□□□□ 0.1
LINC00642-201ENST00000419459 RHPN1Q8TCX5 695 aa15.66■□□□□ 0.1
LINC00642-201ENST00000419459 RPGRQ92834 1020 aaKnown RBP15.66■□□□□ 0.1
LINC00642-201ENST00000419459 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
LINC00642-201ENST00000419459 WWC3Q9ULE0 1092 aa15.66■□□□□ 0.1
LINC00642-201ENST00000419459 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
LINC00642-201ENST00000419459 LRP5O75197 1615 aa15.66■□□□□ 0.1
LINC00642-201ENST00000419459 ESPNB1AK53 854 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 MPHOSPH8Q99549 860 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 RIC1Q4ADV7 1423 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 RTL9Q8NET4 1388 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 SNAP23O00161 211 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 EYA2O00167 538 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 PTGER2P43116 358 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 TFCP2Q12800 502 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 SKOR2Q2VWA4 1001 aaPredicted RBP15.65■□□□□ 0.1
LINC00642-201ENST00000419459 DDX46Q7L014 1031 aaKnown RBP15.65■□□□□ 0.1
LINC00642-201ENST00000419459 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
LINC00642-201ENST00000419459 PANK2Q9BZ23 570 aa15.65■□□□□ 0.1
LINC00642-201ENST00000419459 SRGNP10124 158 aa15.64■□□□□ 0.09
LINC00642-201ENST00000419459 TSHZ3Q63HK5 1081 aa15.64■□□□□ 0.09
LINC00642-201ENST00000419459 SGIP1Q9BQI5 828 aa15.64■□□□□ 0.09
LINC00642-201ENST00000419459 TAF5LO75529 589 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 TPM2P07951 284 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 POLD1P28340 1107 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 IGHMBP2P38935 993 aaKnown RBP15.63■□□□□ 0.09
LINC00642-201ENST00000419459 ANKRD18AQ8IVF6 992 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 SNX21Q969T3 373 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 KIF1BPQ96EK5 621 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 CDC5LQ99459 802 aaKnown RBP15.63■□□□□ 0.09
LINC00642-201ENST00000419459 RIPOR2Q9Y4F9 1068 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 C10orf71Q711Q0 1435 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 A0A1B0GUL6 1792 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
LINC00642-201ENST00000419459 WTIPA6NIX2 430 aaPredicted RBP15.63■□□□□ 0.09
LINC00642-201ENST00000419459 DDIT3P35638 169 aa15.63■□□□□ 0.09
LINC00642-201ENST00000419459 PDE6BP35913 854 aa15.62■□□□□ 0.09
LINC00642-201ENST00000419459 RPS8P62241 208 aaKnown RBP15.62■□□□□ 0.09
LINC00642-201ENST00000419459 HSP90AB4PQ58FF6 505 aa15.62■□□□□ 0.09
LINC00642-201ENST00000419459 ZNF622Q969S3 477 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00642-201ENST00000419459 KIF13BQ9NQT8 1826 aa15.62■□□□□ 0.09
LINC00642-201ENST00000419459 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 IL15P40933 162 aaPredicted RBP15.61■□□□□ 0.09
LINC00642-201ENST00000419459 METTL24Q5JXM2 366 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 C2CD5Q86YS7 1000 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 EAF2Q96CJ1 260 aaPredicted RBP15.61■□□□□ 0.09
LINC00642-201ENST00000419459 TLR7Q9NYK1 1049 aaKnown RBP15.61■□□□□ 0.09
LINC00642-201ENST00000419459 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 CIAO1O76071 339 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 GRAPQ13588 217 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 GRAPLQ8TC17 118 aaPredicted RBP15.61■□□□□ 0.09
LINC00642-201ENST00000419459 TRIM44Q96DX7 344 aaPredicted RBP15.61■□□□□ 0.09
LINC00642-201ENST00000419459 GBP4Q96PP9 640 aa15.61■□□□□ 0.09
LINC00642-201ENST00000419459 GZF1Q9H116 711 aaPredicted RBP15.61■□□□□ 0.09
LINC00642-201ENST00000419459 SLX4Q8IY92 1834 aa15.6■□□□□ 0.09
LINC00642-201ENST00000419459 TIMM10P62072 90 aa15.6■□□□□ 0.09
LINC00642-201ENST00000419459 CHRNDQ07001 517 aa15.6■□□□□ 0.09
LINC00642-201ENST00000419459 AACSQ86V21 672 aa15.6■□□□□ 0.09
LINC00642-201ENST00000419459 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
LINC00642-201ENST00000419459 CCDC8Q9H0W5 538 aaPredicted RBP15.6■□□□□ 0.09
LINC00642-201ENST00000419459 H0YIN7 160 aa15.6■□□□□ 0.09
LINC00642-201ENST00000419459 RBM25P49756 843 aaKnown RBP15.6■□□□□ 0.09
LINC00642-201ENST00000419459 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
LINC00642-201ENST00000419459 BSDC1Q9NW68 430 aaPredicted RBP15.6■□□□□ 0.09
LINC00642-201ENST00000419459 SOCS7O14512 581 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 HOXA10P31260 410 aaPredicted RBP15.59■□□□□ 0.09
LINC00642-201ENST00000419459 TNNI3KQ59H18 835 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 CLASRPQ8N2M8 674 aaKnown RBP15.59■□□□□ 0.09
LINC00642-201ENST00000419459 VGLL2Q8N8G2 317 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 CEP126Q9P2H0 1117 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
LINC00642-201ENST00000419459 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 FPGT-TNNI3KV9GXZ4 949 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 KIAA1551Q9HCM1 1747 aa15.59■□□□□ 0.09
LINC00642-201ENST00000419459 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms