RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 R3HDMLQ9H3Y0 253 aa13.95□□□□□ -0.18
RAPGEF1-205ENST00000419442 POLLQ9UGP5 575 aa13.95□□□□□ -0.18
RAPGEF1-205ENST00000419442 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 UBE2Q2LH0YL09 131 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 SCARF1Q14162 830 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 PDIA6Q15084 440 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 EYA3Q99504 573 aa13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-205ENST00000419442 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 ZNF646O15015 1829 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 SREBF2Q12772 1141 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 AGBL3Q8NEM8 1001 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 CFAP53Q96M91 514 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
RAPGEF1-205ENST00000419442 C6orf229H3BNL8 230 aa13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 GPSM2P81274 684 aa13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 TBC1D16Q8TBP0 767 aa13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 CELF1Q92879 486 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 ARMC5Q96C12 935 aa13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 GMLQ99445 158 aa13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 MKI67P46013 3256 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-205ENST00000419442 TRIOBPQ9H2D6 2365 aa13.91□□□□□ -0.18
RAPGEF1-205ENST00000419442 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-205ENST00000419442 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-205ENST00000419442 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-205ENST00000419442 HTTP42858 3142 aa13.91□□□□□ -0.18
RAPGEF1-205ENST00000419442 ALDH1A1P00352 501 aa13.9□□□□□ -0.18
RAPGEF1-205ENST00000419442 TCIRG1Q13488 830 aa13.9□□□□□ -0.18
RAPGEF1-205ENST00000419442 PODXL2Q9NZ53 605 aa13.9□□□□□ -0.18
RAPGEF1-205ENST00000419442 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
RAPGEF1-205ENST00000419442 EN2P19622 333 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-205ENST00000419442 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
RAPGEF1-205ENST00000419442 ZC3H12CQ9C0D7 883 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-205ENST00000419442 MYOZ2Q9NPC6 264 aa13.89□□□□□ -0.19
RAPGEF1-205ENST00000419442 DLL1O00548 723 aa13.88□□□□□ -0.19
RAPGEF1-205ENST00000419442 LDLRAD1Q5T700 205 aa13.88□□□□□ -0.19
RAPGEF1-205ENST00000419442 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
RAPGEF1-205ENST00000419442 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
RAPGEF1-205ENST00000419442 USP17L8P0C7I0 530 aa13.87□□□□□ -0.19
RAPGEF1-205ENST00000419442 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-205ENST00000419442 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-205ENST00000419442 PRAMEF18Q5VWM3 479 aa13.87□□□□□ -0.19
RAPGEF1-205ENST00000419442 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
RAPGEF1-205ENST00000419442 CEP290O15078 2479 aa13.87□□□□□ -0.19
RAPGEF1-205ENST00000419442 ANXA1P04083 346 aa13.86□□□□□ -0.19
RAPGEF1-205ENST00000419442 INHBEP58166 350 aa13.86□□□□□ -0.19
RAPGEF1-205ENST00000419442 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
RAPGEF1-205ENST00000419442 ERO1AQ96HE7 468 aa13.86□□□□□ -0.19
RAPGEF1-205ENST00000419442 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-205ENST00000419442 MANSC4A6NHS7 340 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 NF2P35240 595 aa13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 RPS8P62241 208 aaKnown RBP13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 TTLL12Q14166 644 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 XAGE3Q8WTP9 111 aa13.85□□□□□ -0.19
RAPGEF1-205ENST00000419442 ARMC9Q7Z3E5 817 aa13.84□□□□□ -0.19
RAPGEF1-205ENST00000419442 ISCA1Q9BUE6 129 aa13.84□□□□□ -0.19
RAPGEF1-205ENST00000419442 H0YGN5 161 aa13.83□□□□□ -0.2
RAPGEF1-205ENST00000419442 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAPGEF1-205ENST00000419442 UFL1O94874 794 aa13.83□□□□□ -0.2
RAPGEF1-205ENST00000419442 EIF2S2P20042 333 aaKnown RBP13.83□□□□□ -0.2
RAPGEF1-205ENST00000419442 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
RAPGEF1-205ENST00000419442 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
RAPGEF1-205ENST00000419442 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 USP17L3A6NCW0 530 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 USP17L4A6NCW7 530 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 G3V3G9 751 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 WNT10BO00744 389 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 ZBTB48P10074 688 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 CAP1Q01518 475 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 AIMP1Q12904 312 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 USP17L1Q7RTZ2 530 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 CD99L2Q8TCZ2 262 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 ECM29Q5VYK3 1845 aa13.82□□□□□ -0.2
RAPGEF1-205ENST00000419442 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
RAPGEF1-205ENST00000419442 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
RAPGEF1-205ENST00000419442 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
RAPGEF1-205ENST00000419442 MMP14P50281 582 aa13.8□□□□□ -0.2
RAPGEF1-205ENST00000419442 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-205ENST00000419442 PLBD2Q8NHP8 589 aa13.8□□□□□ -0.2
RAPGEF1-205ENST00000419442 WNK4Q96J92 1243 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms