RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 SKAP1Q86WV1 359 aa10.55□□□□□ -0.72
CNOT9-203ENST00000418808 RPAP2Q8IXW5 612 aaPredicted RBP10.55□□□□□ -0.72
CNOT9-203ENST00000418808 GRAPLQ8TC17 118 aaPredicted RBP10.55□□□□□ -0.72
CNOT9-203ENST00000418808 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
CNOT9-203ENST00000418808 NFKBIEO00221 500 aa10.54□□□□□ -0.72
CNOT9-203ENST00000418808 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
CNOT9-203ENST00000418808 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
CNOT9-203ENST00000418808 CACNA1SQ13698 1873 aa10.54□□□□□ -0.72
CNOT9-203ENST00000418808 CCDC152Q4G0S7 254 aa10.54□□□□□ -0.72
CNOT9-203ENST00000418808 SMC5Q8IY18 1101 aa10.54□□□□□ -0.72
CNOT9-203ENST00000418808 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
CNOT9-203ENST00000418808 MINPP1Q9UNW1 487 aa10.54□□□□□ -0.72
CNOT9-203ENST00000418808 H0YIN7 160 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 EYA2O00167 538 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 FGFR2P21802 821 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 GPSM2P81274 684 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 GPR101Q96P66 508 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-203ENST00000418808 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-203ENST00000418808 EXOC6BQ9Y2D4 811 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
CNOT9-203ENST00000418808 TAF5LO75529 589 aa10.52□□□□□ -0.73
CNOT9-203ENST00000418808 IFIT5Q13325 482 aaKnown RBP10.52□□□□□ -0.73
CNOT9-203ENST00000418808 HELBQ8NG08 1087 aaPredicted RBP10.52□□□□□ -0.73
CNOT9-203ENST00000418808 OTUD7AQ8TE49 926 aaPredicted RBP10.52□□□□□ -0.73
CNOT9-203ENST00000418808 SIL1Q9H173 461 aa10.52□□□□□ -0.73
CNOT9-203ENST00000418808 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
CNOT9-203ENST00000418808 SALL3Q9BXA9 1300 aa10.52□□□□□ -0.73
CNOT9-203ENST00000418808 ZNF646O15015 1829 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 ARFGEF1Q9Y6D6 1849 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 FER1L6Q2WGJ9 1857 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 PPEF1O14829 653 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 C21orf2O43822 256 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 SMARCA5O60264 1052 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 BBOX1O75936 387 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 CIAO1O76071 339 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 CHRNDQ07001 517 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 DDX46Q7L014 1031 aaKnown RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 TTLL6Q8N841 843 aa10.51□□□□□ -0.73
CNOT9-203ENST00000418808 RPGRQ92834 1020 aaKnown RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 ZNF622Q969S3 477 aaKnown RBP eCLIP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 EAF2Q96CJ1 260 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 RBM17Q96I25 401 aaKnown RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 TLR7Q9NYK1 1049 aaKnown RBP10.51□□□□□ -0.73
CNOT9-203ENST00000418808 PDE4AP27815 886 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 ADORA1P30542 326 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 TFCP2Q12800 502 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 AAMPQ13685 434 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 CCDC57Q2TAC2 916 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
CNOT9-203ENST00000418808 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
CNOT9-203ENST00000418808 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
CNOT9-203ENST00000418808 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 PIM2Q9P1W9 311 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 CHMP3Q9Y3E7 222 aa10.5□□□□□ -0.73
CNOT9-203ENST00000418808 COL1A1P02452 1464 aaPredicted RBP10.49□□□□□ -0.73
CNOT9-203ENST00000418808 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
CNOT9-203ENST00000418808 DALRD3Q5D0E6 543 aaKnown RBP10.49□□□□□ -0.73
CNOT9-203ENST00000418808 LDHAL6AQ6ZMR3 332 aa10.49□□□□□ -0.73
CNOT9-203ENST00000418808 ANKRD18AQ8IVF6 992 aa10.49□□□□□ -0.73
CNOT9-203ENST00000418808 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
CNOT9-203ENST00000418808 CNKSR1Q969H4 720 aa10.49□□□□□ -0.73
CNOT9-203ENST00000418808 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
CNOT9-203ENST00000418808 ZNF609O15014 1411 aa10.49□□□□□ -0.73
CNOT9-203ENST00000418808 NPHP1O15259 732 aa10.48□□□□□ -0.73
CNOT9-203ENST00000418808 PDE8BO95263 885 aa10.48□□□□□ -0.73
CNOT9-203ENST00000418808 ALDH1B1P30837 517 aa10.48□□□□□ -0.73
CNOT9-203ENST00000418808 RHPN1Q8TCX5 695 aa10.48□□□□□ -0.73
CNOT9-203ENST00000418808 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
CNOT9-203ENST00000418808 IL1RAPL2Q9NP60 686 aa10.48□□□□□ -0.73
CNOT9-203ENST00000418808 DBNLQ9UJU6 430 aaKnown RBP10.48□□□□□ -0.73
CNOT9-203ENST00000418808 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
CNOT9-203ENST00000418808 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
CNOT9-203ENST00000418808 SCN9AQ15858 1988 aa10.47□□□□□ -0.73
CNOT9-203ENST00000418808 HSP90B1P14625 803 aaKnown RBP10.47□□□□□ -0.73
CNOT9-203ENST00000418808 IL15P40933 162 aaPredicted RBP10.47□□□□□ -0.73
CNOT9-203ENST00000418808 TIMM10P62072 90 aa10.47□□□□□ -0.73
CNOT9-203ENST00000418808 RASSF7Q02833 373 aa10.47□□□□□ -0.73
CNOT9-203ENST00000418808 KCNQ5Q9NR82 932 aa10.47□□□□□ -0.73
CNOT9-203ENST00000418808 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
CNOT9-203ENST00000418808 YDJCA8MPS7 323 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 NUCB1Q02818 461 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 SCARF1Q14162 830 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 TNNI3KQ59H18 835 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 C15orf52Q6ZUT6 534 aaKnown RBP10.46□□□□□ -0.73
CNOT9-203ENST00000418808 FAM84BQ96KN1 310 aaPredicted RBP10.46□□□□□ -0.73
CNOT9-203ENST00000418808 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 CNNM1Q9NRU3 951 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 FPGT-TNNI3KV9GXZ4 949 aa10.46□□□□□ -0.73
CNOT9-203ENST00000418808 ZNF804BA4D1E1 1349 aa10.45□□□□□ -0.74
CNOT9-203ENST00000418808 XDHP47989 1333 aa10.45□□□□□ -0.74
CNOT9-203ENST00000418808 MROH5Q6ZUA9 1318 aa10.45□□□□□ -0.74
CNOT9-203ENST00000418808 LTBP3Q9NS15 1303 aa10.45□□□□□ -0.74
CNOT9-203ENST00000418808 IGHMBP2P38935 993 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms