RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 DBNDD1Q9H9R9 158 aa20.92■□□□□ 0.94
LINC00404-201ENST00000418660 GPRC5DQ9NZD1 345 aa20.92■□□□□ 0.94
LINC00404-201ENST00000418660 XDHP47989 1333 aa20.92■□□□□ 0.94
LINC00404-201ENST00000418660 MYH3P11055 1940 aa20.92■□□□□ 0.94
LINC00404-201ENST00000418660 UFL1O94874 794 aa20.91■□□□□ 0.94
LINC00404-201ENST00000418660 GMPSP49915 693 aaPredicted RBP20.91■□□□□ 0.94
LINC00404-201ENST00000418660 USP50Q70EL3 339 aaPredicted RBP20.91■□□□□ 0.94
LINC00404-201ENST00000418660 GPR101Q96P66 508 aaPredicted RBP20.91■□□□□ 0.94
LINC00404-201ENST00000418660 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 ALDH1L1O75891 902 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 ITGBL1O95965 494 aaPredicted RBP20.9■□□□□ 0.94
LINC00404-201ENST00000418660 ITGA6P23229 1130 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 ATP2B4P23634 1241 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 DOK7Q18PE1 504 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 SLC4A10Q6U841 1118 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 KLRG1Q96E93 195 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 BCL2L13Q9BXK5 485 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 MINPP1Q9UNW1 487 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 CEP350Q5VT06 3117 aa20.9■□□□□ 0.94
LINC00404-201ENST00000418660 GRM8O00222 908 aa20.89■□□□□ 0.93
LINC00404-201ENST00000418660 ECE2O60344 883 aa20.89■□□□□ 0.93
LINC00404-201ENST00000418660 IGHMBP2P38935 993 aaKnown RBP20.89■□□□□ 0.93
LINC00404-201ENST00000418660 SSH1Q8WYL5 1049 aa20.89■□□□□ 0.93
LINC00404-201ENST00000418660 SRCIN1Q9C0H9 1055 aa20.89■□□□□ 0.93
LINC00404-201ENST00000418660 ADARB2Q9NS39 739 aaKnown RBP20.89■□□□□ 0.93
LINC00404-201ENST00000418660 PTPRCP08575 1304 aa20.88■□□□□ 0.93
LINC00404-201ENST00000418660 FOXO4P98177 505 aa20.88■□□□□ 0.93
LINC00404-201ENST00000418660 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
LINC00404-201ENST00000418660 MAP1SQ66K74 1059 aaPredicted RBP20.88■□□□□ 0.93
LINC00404-201ENST00000418660 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
LINC00404-201ENST00000418660 CNTROBQ8N137 903 aa20.88■□□□□ 0.93
LINC00404-201ENST00000418660 C9orf78Q9NZ63 289 aaPredicted RBP20.88■□□□□ 0.93
LINC00404-201ENST00000418660 G3V3G9 751 aa20.87■□□□□ 0.93
LINC00404-201ENST00000418660 ALDH1L2Q3SY69 923 aa20.87■□□□□ 0.93
LINC00404-201ENST00000418660 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
LINC00404-201ENST00000418660 CREBZFQ9NS37 354 aa20.87■□□□□ 0.93
LINC00404-201ENST00000418660 ANKRD18BA2A2Z9 1011 aa20.86■□□□□ 0.93
LINC00404-201ENST00000418660 PSMD14O00487 310 aa20.86■□□□□ 0.93
LINC00404-201ENST00000418660 DPF2Q92785 391 aa20.86■□□□□ 0.93
LINC00404-201ENST00000418660 MPHOSPH8Q99549 860 aa20.86■□□□□ 0.93
LINC00404-201ENST00000418660 KCNQ5Q9NR82 932 aa20.86■□□□□ 0.93
LINC00404-201ENST00000418660 CNOT7Q9UIV1 285 aaKnown RBP20.86■□□□□ 0.93
LINC00404-201ENST00000418660 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
LINC00404-201ENST00000418660 CCT4P50991 539 aaKnown RBP20.85■□□□□ 0.93
LINC00404-201ENST00000418660 MIER1Q8N108 512 aa20.85■□□□□ 0.93
LINC00404-201ENST00000418660 ZBTB12Q9Y330 459 aaPredicted RBP20.85■□□□□ 0.93
LINC00404-201ENST00000418660 H7C1D1 291 aa20.84■□□□□ 0.93
LINC00404-201ENST00000418660 RPS12P25398 132 aaKnown RBP20.84■□□□□ 0.93
LINC00404-201ENST00000418660 IFIT5Q13325 482 aaKnown RBP20.84■□□□□ 0.93
LINC00404-201ENST00000418660 JMYQ8N9B5 988 aa20.84■□□□□ 0.93
LINC00404-201ENST00000418660 ANKRD2Q9GZV1 360 aa20.84■□□□□ 0.93
LINC00404-201ENST00000418660 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
LINC00404-201ENST00000418660 WTIPA6NIX2 430 aaPredicted RBP20.83■□□□□ 0.93
LINC00404-201ENST00000418660 EPHA10Q5JZY3 1008 aa20.83■□□□□ 0.93
LINC00404-201ENST00000418660 LMBR1LQ6UX01 489 aa20.83■□□□□ 0.93
LINC00404-201ENST00000418660 CHMP3Q9Y3E7 222 aa20.83■□□□□ 0.93
LINC00404-201ENST00000418660 MED23Q9ULK4 1368 aa20.83■□□□□ 0.92
LINC00404-201ENST00000418660 SPEF2Q9C093 1822 aa20.83■□□□□ 0.92
LINC00404-201ENST00000418660 UTYO14607 1347 aa20.82■□□□□ 0.92
LINC00404-201ENST00000418660 TMEM88BA6NKF7 163 aa20.82■□□□□ 0.92
LINC00404-201ENST00000418660 VIL1P09327 827 aaKnown RBP20.82■□□□□ 0.92
LINC00404-201ENST00000418660 PODNQ7Z5L7 613 aa20.82■□□□□ 0.92
LINC00404-201ENST00000418660 MICALL2Q8IY33 904 aa20.82■□□□□ 0.92
LINC00404-201ENST00000418660 SMC4Q9NTJ3 1288 aa20.82■□□□□ 0.92
LINC00404-201ENST00000418660 PGAP2Q9UHJ9 254 aa20.82■□□□□ 0.92
LINC00404-201ENST00000418660 ZC3H15Q8WU90 426 aaKnown RBP20.81■□□□□ 0.92
LINC00404-201ENST00000418660 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
LINC00404-201ENST00000418660 NBPF7P0C2Y1 421 aaPredicted RBP20.8■□□□□ 0.92
LINC00404-201ENST00000418660 HIRAP54198 1017 aaPredicted RBP20.8■□□□□ 0.92
LINC00404-201ENST00000418660 CHRNDQ07001 517 aa20.8■□□□□ 0.92
LINC00404-201ENST00000418660 CCDC57Q2TAC2 916 aa20.8■□□□□ 0.92
LINC00404-201ENST00000418660 TRPM4Q8TD43 1214 aa20.8■□□□□ 0.92
LINC00404-201ENST00000418660 ZNF804BA4D1E1 1349 aa20.79■□□□□ 0.92
LINC00404-201ENST00000418660 KAZALD1Q96I82 304 aa20.79■□□□□ 0.92
LINC00404-201ENST00000418660 SUCLG2Q96I99 432 aa20.79■□□□□ 0.92
LINC00404-201ENST00000418660 RSBN1LQ6PCB5 846 aaPredicted RBP20.78■□□□□ 0.92
LINC00404-201ENST00000418660 COA1Q9GZY4 146 aa20.78■□□□□ 0.92
LINC00404-201ENST00000418660 ZNF609O15014 1411 aa20.78■□□□□ 0.92
LINC00404-201ENST00000418660 SCN9AQ15858 1988 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 USP17L3A6NCW0 530 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 USP17L4A6NCW7 530 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 KCNJ4P48050 445 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 BRPF1P55201 1214 aaPredicted RBP20.77■□□□□ 0.92
LINC00404-201ENST00000418660 TAF7LQ5H9L4 462 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 USP17L1Q7RTZ2 530 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 SAMD7Q7Z3H4 446 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 TXNRD3Q86VQ6 643 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 AGBL3Q8NEM8 1001 aa20.77■□□□□ 0.92
LINC00404-201ENST00000418660 MKRN1Q9UHC7 482 aaKnown RBP20.77■□□□□ 0.92
LINC00404-201ENST00000418660 TBC1D10BQ4KMP7 808 aaPredicted RBP20.76■□□□□ 0.91
LINC00404-201ENST00000418660 LDHAL6AQ6ZMR3 332 aa20.76■□□□□ 0.91
LINC00404-201ENST00000418660 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
LINC00404-201ENST00000418660 CNTNAP1P78357 1384 aa20.75■□□□□ 0.91
LINC00404-201ENST00000418660 TRAF5O00463 557 aa20.75■□□□□ 0.91
LINC00404-201ENST00000418660 FMR1Q06787 632 aaKnown RBP eCLIP20.75■□□□□ 0.91
LINC00404-201ENST00000418660 USP44Q9H0E7 712 aa20.75■□□□□ 0.91
LINC00404-201ENST00000418660 CNNM1Q9NRU3 951 aa20.75■□□□□ 0.91
LINC00404-201ENST00000418660 NOB1Q9ULX3 412 aaKnown RBP20.75■□□□□ 0.91
LINC00404-201ENST00000418660 TAF5LO75529 589 aa20.74■□□□□ 0.91
LINC00404-201ENST00000418660 KLRK1P26718 216 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms