RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
NPHP1-205ENST00000418527 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
NPHP1-205ENST00000418527 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
NPHP1-205ENST00000418527 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
NPHP1-205ENST00000418527 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 UBN2Q6ZU65 1347 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 PDE8AO60658 829 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
NPHP1-205ENST00000418527 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
NPHP1-205ENST00000418527 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
NPHP1-205ENST00000418527 UBR3Q6ZT12 1888 aa13.17□□□□□ -0.3
NPHP1-205ENST00000418527 FOXO4P98177 505 aa13.17□□□□□ -0.3
NPHP1-205ENST00000418527 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
NPHP1-205ENST00000418527 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
NPHP1-205ENST00000418527 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
NPHP1-205ENST00000418527 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
NPHP1-205ENST00000418527 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
NPHP1-205ENST00000418527 EP400Q96L91 3159 aa13.17□□□□□ -0.3
NPHP1-205ENST00000418527 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
NPHP1-205ENST00000418527 CTSWP56202 376 aa13.16□□□□□ -0.3
NPHP1-205ENST00000418527 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
NPHP1-205ENST00000418527 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
NPHP1-205ENST00000418527 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
NPHP1-205ENST00000418527 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
NPHP1-205ENST00000418527 NTSR2O95665 410 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
NPHP1-205ENST00000418527 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 FBXO22Q8NEZ5 403 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 SIL1Q9H173 461 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
NPHP1-205ENST00000418527 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
NPHP1-205ENST00000418527 MYH3P11055 1940 aa13.14□□□□□ -0.31
NPHP1-205ENST00000418527 ANKRD18BA2A2Z9 1011 aa13.14□□□□□ -0.31
NPHP1-205ENST00000418527 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
NPHP1-205ENST00000418527 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
NPHP1-205ENST00000418527 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
NPHP1-205ENST00000418527 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
NPHP1-205ENST00000418527 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
NPHP1-205ENST00000418527 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
NPHP1-205ENST00000418527 CSF1RP07333 972 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 PDE4AP27815 886 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 PTPN12Q05209 780 aaKnown RBP13.13□□□□□ -0.31
NPHP1-205ENST00000418527 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 TTLL11Q8NHH1 800 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 GPATCH3Q96I76 525 aa13.13□□□□□ -0.31
NPHP1-205ENST00000418527 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
NPHP1-205ENST00000418527 IFIT2P09913 472 aaKnown RBP13.12□□□□□ -0.31
NPHP1-205ENST00000418527 GYS1P13807 737 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 ITGA6P23229 1130 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
NPHP1-205ENST00000418527 ST5P78524 1137 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 NFIXQ14938 502 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 IL1RAPL2Q9NP60 686 aa13.12□□□□□ -0.31
NPHP1-205ENST00000418527 CIAO1O76071 339 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
NPHP1-205ENST00000418527 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
NPHP1-205ENST00000418527 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 NLRP3Q96P20 1036 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 GREM2Q9H772 168 aa13.11□□□□□ -0.31
NPHP1-205ENST00000418527 EYA2O00167 538 aa13.1□□□□□ -0.31
NPHP1-205ENST00000418527 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
NPHP1-205ENST00000418527 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
NPHP1-205ENST00000418527 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
NPHP1-205ENST00000418527 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
NPHP1-205ENST00000418527 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
NPHP1-205ENST00000418527 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
NPHP1-205ENST00000418527 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
NPHP1-205ENST00000418527 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
NPHP1-205ENST00000418527 LAMB2P55268 1798 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 G3V3G9 751 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 SERPINB2P05120 415 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 MX1P20591 662 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 COL24A1Q17RW2 1714 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 AACSQ86V21 672 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 ZNF594Q96JF6 807 aaPredicted RBP13.09□□□□□ -0.31
NPHP1-205ENST00000418527 PARP3Q9Y6F1 533 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
NPHP1-205ENST00000418527 ERC2O15083 957 aa13.08□□□□□ -0.32
NPHP1-205ENST00000418527 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
NPHP1-205ENST00000418527 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.32
NPHP1-205ENST00000418527 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
NPHP1-205ENST00000418527 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms