RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 ADM5C9JUS6 153 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 G3V3G9 751 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 NUP98P52948 1817 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 RIPK4P57078 832 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 DOK7Q18PE1 504 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
SDCCAG3-205ENST00000417512 EGFRP00533 1210 aa16.31■□□□□ 0.2
SDCCAG3-205ENST00000417512 CALD1Q05682 793 aaKnown RBP16.31■□□□□ 0.2
SDCCAG3-205ENST00000417512 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
SDCCAG3-205ENST00000417512 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
SDCCAG3-205ENST00000417512 KCNQ5Q9NR82 932 aa16.31■□□□□ 0.2
SDCCAG3-205ENST00000417512 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
SDCCAG3-205ENST00000417512 ECE2O60344 883 aa16.3■□□□□ 0.2
SDCCAG3-205ENST00000417512 GPSM2P81274 684 aa16.3■□□□□ 0.2
SDCCAG3-205ENST00000417512 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
SDCCAG3-205ENST00000417512 ZC3H12CQ9C0D7 883 aaKnown RBP16.3■□□□□ 0.2
SDCCAG3-205ENST00000417512 POLLQ9UGP5 575 aa16.3■□□□□ 0.2
SDCCAG3-205ENST00000417512 SLFN5Q08AF3 891 aa16.29■□□□□ 0.2
SDCCAG3-205ENST00000417512 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
SDCCAG3-205ENST00000417512 KIF4BQ2VIQ3 1234 aa16.29■□□□□ 0.2
SDCCAG3-205ENST00000417512 CTU1Q7Z7A3 348 aaKnown RBP16.29■□□□□ 0.2
SDCCAG3-205ENST00000417512 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
SDCCAG3-205ENST00000417512 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
SDCCAG3-205ENST00000417512 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
SDCCAG3-205ENST00000417512 CASP8AP2Q9UKL3 1982 aa16.28■□□□□ 0.2
SDCCAG3-205ENST00000417512 SLC10A3P09131 477 aa16.28■□□□□ 0.2
SDCCAG3-205ENST00000417512 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
SDCCAG3-205ENST00000417512 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
SDCCAG3-205ENST00000417512 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
SDCCAG3-205ENST00000417512 IL16Q14005 1332 aa16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 CDCA5Q96FF9 252 aa16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 GGA3Q9NZ52 723 aa16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
SDCCAG3-205ENST00000417512 ATP5J2-PTCD1G3V325 749 aa16.26■□□□□ 0.19
SDCCAG3-205ENST00000417512 SCARF1Q14162 830 aa16.26■□□□□ 0.19
SDCCAG3-205ENST00000417512 RTL5Q5HYW3 569 aaPredicted RBP16.26■□□□□ 0.19
SDCCAG3-205ENST00000417512 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
SDCCAG3-205ENST00000417512 TBC1D16Q8TBP0 767 aa16.26■□□□□ 0.19
SDCCAG3-205ENST00000417512 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
SDCCAG3-205ENST00000417512 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 PRPF38BQ5VTL8 546 aaKnown RBP16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 RTL9Q8NET4 1388 aa16.25■□□□□ 0.19
SDCCAG3-205ENST00000417512 FKBP1BP68106 108 aa16.24■□□□□ 0.19
SDCCAG3-205ENST00000417512 ANGEL2Q5VTE6 544 aaKnown RBP16.24■□□□□ 0.19
SDCCAG3-205ENST00000417512 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
SDCCAG3-205ENST00000417512 HPS5Q9UPZ3 1129 aa16.24■□□□□ 0.19
SDCCAG3-205ENST00000417512 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
SDCCAG3-205ENST00000417512 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
SDCCAG3-205ENST00000417512 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
SDCCAG3-205ENST00000417512 RASAL3Q86YV0 1011 aa16.23■□□□□ 0.19
SDCCAG3-205ENST00000417512 AGBL3Q8NEM8 1001 aa16.23■□□□□ 0.19
SDCCAG3-205ENST00000417512 ISCA1Q9BUE6 129 aa16.23■□□□□ 0.19
SDCCAG3-205ENST00000417512 UFL1O94874 794 aa16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 TBC1D8O95759 1140 aa16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 HSP90B1P14625 803 aaKnown RBP16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 HDGFL1Q5TGJ6 251 aa16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 RSBN1LQ6PCB5 846 aaPredicted RBP16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 PODXL2Q9NZ53 605 aa16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 DBF4Q9UBU7 674 aaPredicted RBP16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
SDCCAG3-205ENST00000417512 CHL1O00533 1208 aa16.21■□□□□ 0.19
SDCCAG3-205ENST00000417512 USP17L8P0C7I0 530 aa16.21■□□□□ 0.19
SDCCAG3-205ENST00000417512 ZNF280AP59817 542 aaPredicted RBP16.21■□□□□ 0.19
SDCCAG3-205ENST00000417512 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
SDCCAG3-205ENST00000417512 UBE2Q2LH0YL09 131 aa16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 TTLL12Q14166 644 aaPredicted RBP16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 ZNF296Q8WUU4 475 aaPredicted RBP16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 CCDC136Q96JN2 1154 aa16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 HYPKQ9NX55 129 aa16.2■□□□□ 0.18
SDCCAG3-205ENST00000417512 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
SDCCAG3-205ENST00000417512 AAMPQ13685 434 aa16.19■□□□□ 0.18
SDCCAG3-205ENST00000417512 RIC3Q7Z5B4 369 aa16.19■□□□□ 0.18
SDCCAG3-205ENST00000417512 SEC31BQ9NQW1 1179 aa16.19■□□□□ 0.18
SDCCAG3-205ENST00000417512 MS4A1P11836 297 aa16.18■□□□□ 0.18
SDCCAG3-205ENST00000417512 MOB2Q70IA6 237 aa16.18■□□□□ 0.18
SDCCAG3-205ENST00000417512 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
SDCCAG3-205ENST00000417512 USP17L3A6NCW0 530 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 USP17L4A6NCW7 530 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 HOXB7P09629 217 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 NF2P35240 595 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 TM4SF4P48230 202 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 CCDC152Q4G0S7 254 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 PRAMEF18Q5VWM3 479 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms