RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SNAP23O00161 211 aa20.7■□□□□ 0.9
CALD1-204ENST00000417172 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
CALD1-204ENST00000417172 CASC1Q6TDU7 716 aa20.7■□□□□ 0.9
CALD1-204ENST00000417172 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
CALD1-204ENST00000417172 ATP5JP18859 108 aa20.69■□□□□ 0.9
CALD1-204ENST00000417172 DDR1Q08345 913 aa20.69■□□□□ 0.9
CALD1-204ENST00000417172 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
CALD1-204ENST00000417172 MPHOSPH8Q99549 860 aa20.69■□□□□ 0.9
CALD1-204ENST00000417172 TM4SF1P30408 202 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 XAGE2Q96GT9 111 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 TAF5LO75529 589 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 ATP2B3Q16720 1220 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 PRR5LQ6MZQ0 368 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
CALD1-204ENST00000417172 NLRP3Q96P20 1036 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 ESYT1Q9BSJ8 1104 aa20.68■□□□□ 0.9
CALD1-204ENST00000417172 ARAP2Q8WZ64 1704 aa20.67■□□□□ 0.9
CALD1-204ENST00000417172 PDE8BO95263 885 aa20.67■□□□□ 0.9
CALD1-204ENST00000417172 IGHMBP2P38935 993 aaKnown RBP20.67■□□□□ 0.9
CALD1-204ENST00000417172 DEFB132Q7Z7B7 95 aa20.67■□□□□ 0.9
CALD1-204ENST00000417172 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
CALD1-204ENST00000417172 AKAP2Q9Y2D5 859 aa20.67■□□□□ 0.9
CALD1-204ENST00000417172 SERPINB2P05120 415 aa20.66■□□□□ 0.9
CALD1-204ENST00000417172 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
CALD1-204ENST00000417172 EVI5LQ96CN4 794 aa20.66■□□□□ 0.9
CALD1-204ENST00000417172 IPO9Q96P70 1041 aaKnown RBP20.66■□□□□ 0.9
CALD1-204ENST00000417172 MROH5Q6ZUA9 1318 aa20.66■□□□□ 0.9
CALD1-204ENST00000417172 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
CALD1-204ENST00000417172 CDC5LQ99459 802 aaKnown RBP20.65■□□□□ 0.9
CALD1-204ENST00000417172 MSL1Q68DK7 614 aa20.65■□□□□ 0.9
CALD1-204ENST00000417172 ANKRD18AQ8IVF6 992 aa20.65■□□□□ 0.9
CALD1-204ENST00000417172 AKAP11Q9UKA4 1901 aa20.64■□□□□ 0.9
CALD1-204ENST00000417172 ANKRD31Q8N7Z5 1873 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
CALD1-204ENST00000417172 CHGBP05060 677 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 CHRNDQ07001 517 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 SCARF1Q14162 830 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 GORABQ5T7V8 394 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 CWC27Q6UX04 472 aaKnown RBP20.64■□□□□ 0.89
CALD1-204ENST00000417172 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
CALD1-204ENST00000417172 HAUS7Q99871 368 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 USP26Q9BXU7 913 aa20.64■□□□□ 0.89
CALD1-204ENST00000417172 RBM25P49756 843 aaKnown RBP20.63■□□□□ 0.89
CALD1-204ENST00000417172 FSD1Q9BTV5 496 aa20.63■□□□□ 0.89
CALD1-204ENST00000417172 FGFR2P21802 821 aa20.63■□□□□ 0.89
CALD1-204ENST00000417172 PUM3Q15397 648 aaKnown RBP20.63■□□□□ 0.89
CALD1-204ENST00000417172 MYO5AQ9Y4I1 1855 aaKnown RBP20.62■□□□□ 0.89
CALD1-204ENST00000417172 IFIT1P09914 478 aaKnown RBP20.62■□□□□ 0.89
CALD1-204ENST00000417172 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
CALD1-204ENST00000417172 TTC39AQ5SRH9 613 aa20.62■□□□□ 0.89
CALD1-204ENST00000417172 PI16Q6UXB8 463 aa20.62■□□□□ 0.89
CALD1-204ENST00000417172 ILDR1Q86SU0 546 aaPredicted RBP20.62■□□□□ 0.89
CALD1-204ENST00000417172 SNRKQ9NRH2 765 aa20.62■□□□□ 0.89
CALD1-204ENST00000417172 GOLIM4O00461 696 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 FAM227BQ96M60 508 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 DIAPH3Q9NSV4 1193 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 SLC15A2Q16348 729 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 CCDC158Q5M9N0 1113 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 KIF2CQ99661 725 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 ANTXR1Q9H6X2 564 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 ANO2Q9NQ90 1003 aa20.61■□□□□ 0.89
CALD1-204ENST00000417172 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
CALD1-204ENST00000417172 SGSM2O43147 1006 aa20.6■□□□□ 0.89
CALD1-204ENST00000417172 REC8O95072 547 aa20.6■□□□□ 0.89
CALD1-204ENST00000417172 PHKA1P46020 1223 aa20.6■□□□□ 0.89
CALD1-204ENST00000417172 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
CALD1-204ENST00000417172 ST5P78524 1137 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 NMIQ13287 307 aaPredicted RBP20.59■□□□□ 0.89
CALD1-204ENST00000417172 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
CALD1-204ENST00000417172 SLFNL1Q499Z3 407 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 LPIN2Q92539 896 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 PAG1Q9NWQ8 432 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 MINPP1Q9UNW1 487 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 QSER1Q2KHR3 1735 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 A0A0D9SFI3 127 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 BAG6P46379 1132 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
CALD1-204ENST00000417172 NLGN1Q8N2Q7 840 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 FLAD1Q8NFF5 587 aa20.59■□□□□ 0.89
CALD1-204ENST00000417172 PDGFDQ9GZP0 370 aaPredicted RBP20.59■□□□□ 0.89
CALD1-204ENST00000417172 MMP10P09238 476 aa20.58■□□□□ 0.88
CALD1-204ENST00000417172 MCAMP43121 646 aa20.58■□□□□ 0.88
CALD1-204ENST00000417172 CCDC102BQ68D86 513 aa20.58■□□□□ 0.88
CALD1-204ENST00000417172 SLC5A1P13866 664 aa20.57■□□□□ 0.88
CALD1-204ENST00000417172 STK32BQ9NY57 414 aa20.57■□□□□ 0.88
CALD1-204ENST00000417172 MYH7P12883 1935 aa20.57■□□□□ 0.88
CALD1-204ENST00000417172 ZAP70P43403 619 aa20.57■□□□□ 0.88
CALD1-204ENST00000417172 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
CALD1-204ENST00000417172 CRY2Q49AN0 593 aa20.56■□□□□ 0.88
CALD1-204ENST00000417172 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
CALD1-204ENST00000417172 COL11A2P13942 1736 aaPredicted RBP20.56■□□□□ 0.88
CALD1-204ENST00000417172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.55■□□□□ 0.88
CALD1-204ENST00000417172 BCAMP50895 628 aa20.55■□□□□ 0.88
CALD1-204ENST00000417172 RPGRQ92834 1020 aaKnown RBP20.55■□□□□ 0.88
CALD1-204ENST00000417172 KLRK1P26718 216 aa20.54■□□□□ 0.88
CALD1-204ENST00000417172 GRAPQ13588 217 aa20.54■□□□□ 0.88
CALD1-204ENST00000417172 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms