RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 SOX10P56693 466 aa20.41■□□□□ 0.86
HLA-DPB1-210ENST00000416804 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
HLA-DPB1-210ENST00000416804 ZC3H12CQ9C0D7 883 aaKnown RBP20.41■□□□□ 0.86
HLA-DPB1-210ENST00000416804 KCNQ5Q9NR82 932 aa20.41■□□□□ 0.86
HLA-DPB1-210ENST00000416804 CHPF2Q9P2E5 772 aa20.41■□□□□ 0.86
HLA-DPB1-210ENST00000416804 VIL1P09327 827 aaKnown RBP20.4■□□□□ 0.86
HLA-DPB1-210ENST00000416804 CTU1Q7Z7A3 348 aaKnown RBP20.4■□□□□ 0.86
HLA-DPB1-210ENST00000416804 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
HLA-DPB1-210ENST00000416804 CDCA5Q96FF9 252 aa20.4■□□□□ 0.86
HLA-DPB1-210ENST00000416804 CSRNP1Q96S65 589 aa20.4■□□□□ 0.86
HLA-DPB1-210ENST00000416804 ZNF609O15014 1411 aa20.39■□□□□ 0.86
HLA-DPB1-210ENST00000416804 CHL1O00533 1208 aa20.39■□□□□ 0.85
HLA-DPB1-210ENST00000416804 HOXB7P09629 217 aa20.39■□□□□ 0.85
HLA-DPB1-210ENST00000416804 RPS8P62241 208 aaKnown RBP20.39■□□□□ 0.85
HLA-DPB1-210ENST00000416804 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
HLA-DPB1-210ENST00000416804 PODXL2Q9NZ53 605 aa20.39■□□□□ 0.85
HLA-DPB1-210ENST00000416804 POLR2AP24928 1970 aaKnown RBP20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 ATP5J2-PTCD1G3V325 749 aa20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 IRS4O14654 1257 aaPredicted RBP20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 FKBP1BP68106 108 aa20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 TRIM28Q13263 835 aaKnown RBP20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
HLA-DPB1-210ENST00000416804 G3V3G9 751 aa20.37■□□□□ 0.85
HLA-DPB1-210ENST00000416804 DCAF8Q5TAQ9 597 aa20.37■□□□□ 0.85
HLA-DPB1-210ENST00000416804 RASAL3Q86YV0 1011 aa20.37■□□□□ 0.85
HLA-DPB1-210ENST00000416804 AGBL3Q8NEM8 1001 aa20.37■□□□□ 0.85
HLA-DPB1-210ENST00000416804 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
HLA-DPB1-210ENST00000416804 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
HLA-DPB1-210ENST00000416804 ZNF280AP59817 542 aaPredicted RBP20.36■□□□□ 0.85
HLA-DPB1-210ENST00000416804 COL4A1P02462 1669 aa20.36■□□□□ 0.85
HLA-DPB1-210ENST00000416804 UFL1O94874 794 aa20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 ANGEL2Q5VTE6 544 aaKnown RBP20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 PRPF38BQ5VTL8 546 aaKnown RBP20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 RSBN1LQ6PCB5 846 aaPredicted RBP20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 GGA1Q9UJY5 639 aa20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
HLA-DPB1-210ENST00000416804 SCARF1Q14162 830 aa20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 ANKIB1Q9P2G1 1089 aa20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 SCN9AQ15858 1988 aa20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 PKN2Q16513 984 aaKnown RBP20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 PITPNM2Q9BZ72 1349 aa20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 LAS1LQ9Y4W2 734 aaKnown RBP20.34■□□□□ 0.85
HLA-DPB1-210ENST00000416804 PAPPA2Q9BXP8 1791 aa20.33■□□□□ 0.84
HLA-DPB1-210ENST00000416804 NEUROD2Q15784 382 aa20.33■□□□□ 0.84
HLA-DPB1-210ENST00000416804 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.84
HLA-DPB1-210ENST00000416804 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
HLA-DPB1-210ENST00000416804 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
HLA-DPB1-210ENST00000416804 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
HLA-DPB1-210ENST00000416804 USP17L8P0C7I0 530 aa20.31■□□□□ 0.84
HLA-DPB1-210ENST00000416804 RALBP1Q15311 655 aa20.31■□□□□ 0.84
HLA-DPB1-210ENST00000416804 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
HLA-DPB1-210ENST00000416804 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
HLA-DPB1-210ENST00000416804 RIC3Q7Z5B4 369 aa20.3■□□□□ 0.84
HLA-DPB1-210ENST00000416804 GMLQ99445 158 aa20.3■□□□□ 0.84
HLA-DPB1-210ENST00000416804 HDAC9Q9UKV0 1011 aa20.3■□□□□ 0.84
HLA-DPB1-210ENST00000416804 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
HLA-DPB1-210ENST00000416804 XDHP47989 1333 aa20.29■□□□□ 0.84
HLA-DPB1-210ENST00000416804 PODNQ7Z5L7 613 aa20.29■□□□□ 0.84
HLA-DPB1-210ENST00000416804 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 DUSP27Q5VZP5 1158 aa20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 ZNF296Q8WUU4 475 aaPredicted RBP20.28■□□□□ 0.84
HLA-DPB1-210ENST00000416804 PSME4Q14997 1843 aa20.27■□□□□ 0.84
HLA-DPB1-210ENST00000416804 PDE8AO60658 829 aa20.27■□□□□ 0.84
HLA-DPB1-210ENST00000416804 ATP2B4P23634 1241 aa20.27■□□□□ 0.84
HLA-DPB1-210ENST00000416804 CCDC191Q8NCU4 936 aa20.27■□□□□ 0.84
HLA-DPB1-210ENST00000416804 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
HLA-DPB1-210ENST00000416804 PCCAP05165 728 aaPredicted RBP20.26■□□□□ 0.83
HLA-DPB1-210ENST00000416804 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
HLA-DPB1-210ENST00000416804 UBE2Q2LH0YL09 131 aa20.25■□□□□ 0.83
HLA-DPB1-210ENST00000416804 TBC1D8O95759 1140 aa20.25■□□□□ 0.83
HLA-DPB1-210ENST00000416804 TM4SF4P48230 202 aa20.25■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MOB2Q70IA6 237 aa20.25■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MYD88Q99836 296 aa20.25■□□□□ 0.83
HLA-DPB1-210ENST00000416804 NF2P35240 595 aa20.24■□□□□ 0.83
HLA-DPB1-210ENST00000416804 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
HLA-DPB1-210ENST00000416804 GPR25O00155 361 aa20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 SREBF2Q12772 1141 aa20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 FBXO46Q6PJ61 603 aaPredicted RBP20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 OGFOD1Q8N543 542 aa20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 CWC25Q9NXE8 425 aaPredicted RBP20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MED23Q9ULK4 1368 aa20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
HLA-DPB1-210ENST00000416804 NBPF9Q3BBW0 867 aa20.22■□□□□ 0.83
HLA-DPB1-210ENST00000416804 CCDC85AQ96PX6 553 aaPredicted RBP20.22■□□□□ 0.83
HLA-DPB1-210ENST00000416804 CDC5LQ99459 802 aaKnown RBP20.22■□□□□ 0.83
HLA-DPB1-210ENST00000416804 PHAXQ9H814 394 aaKnown RBP20.22■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MBIPQ9NS73 344 aa20.22■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MMP14P50281 582 aa20.21■□□□□ 0.83
HLA-DPB1-210ENST00000416804 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
HLA-DPB1-210ENST00000416804 PRAMEF18Q5VWM3 479 aa20.21■□□□□ 0.83
HLA-DPB1-210ENST00000416804 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
HLA-DPB1-210ENST00000416804 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
HLA-DPB1-210ENST00000416804 MYBBP1AQ9BQG0 1328 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms