RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 GOLGA6L3A6NEY3 463 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 MRE11P49959 708 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 PARP10Q53GL7 1025 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
MECP2-204ENST00000415944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.41□□□□□ -0.74
MECP2-204ENST00000415944 KCNB2Q92953 911 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 ALDH8A1Q9H2A2 487 aaPredicted RBP10.41□□□□□ -0.74
MECP2-204ENST00000415944 NIP7Q9Y221 180 aaKnown RBP eCLIP10.41□□□□□ -0.74
MECP2-204ENST00000415944 DDX60Q8IY21 1712 aaKnown RBP10.41□□□□□ -0.74
MECP2-204ENST00000415944 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 C10orf71Q711Q0 1435 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 MYH3P11055 1940 aa10.41□□□□□ -0.74
MECP2-204ENST00000415944 ABCC12Q96J65 1359 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 DLEC1Q9Y238 1755 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 CIAO1O76071 339 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 MBD3O95983 291 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 POLD1P28340 1107 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 NEK4P51957 841 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 KLHL40Q2TBA0 621 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 TNPO1Q92973 898 aaKnown RBP10.4□□□□□ -0.74
MECP2-204ENST00000415944 SETDB2Q96T68 719 aa10.4□□□□□ -0.74
MECP2-204ENST00000415944 CWC25Q9NXE8 425 aaPredicted RBP10.4□□□□□ -0.74
MECP2-204ENST00000415944 RIC1Q4ADV7 1423 aa10.4□□□□□ -0.75
MECP2-204ENST00000415944 BRCA1P38398 1863 aaKnown RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 TNRC6CQ9HCJ0 1690 aaKnown RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 H7C1W4 665 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 NTSR2O95665 410 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 SERPINB2P05120 415 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 CYP2E1P05181 493 aaPredicted RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 IGKV5-2P06315 115 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 ATP5JP18859 108 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 GPTP24298 496 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 IL15P40933 162 aaPredicted RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 TSGA10IPQ3SY00 556 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 BICDL1Q6ZP65 573 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 NLRP10Q86W26 655 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 ANP32BQ92688 251 aaKnown RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 SYAP1Q96A49 352 aaPredicted RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 MYD88Q99836 296 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 BICC1Q9H694 974 aaKnown RBP10.39□□□□□ -0.75
MECP2-204ENST00000415944 AKAP2Q9Y2D5 859 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 PARP3Q9Y6F1 533 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 AK9Q5TCS8 1911 aa10.39□□□□□ -0.75
MECP2-204ENST00000415944 COL11A2P13942 1736 aaPredicted RBP10.38□□□□□ -0.75
MECP2-204ENST00000415944 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
MECP2-204ENST00000415944 HMGB1P09429 215 aaKnown RBP10.38□□□□□ -0.75
MECP2-204ENST00000415944 PDCP20941 246 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 VPS53Q5VIR6 699 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 SUSD4Q5VX71 490 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 AACSQ86V21 672 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 SUCLG2Q96I99 432 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 PLA2G12BQ9BX93 195 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 IL1RAPL2Q9NP60 686 aa10.38□□□□□ -0.75
MECP2-204ENST00000415944 ATP5J2-PTCD1G3V325 749 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 NCLP19338 710 aaKnown RBP10.37□□□□□ -0.75
MECP2-204ENST00000415944 CWF19L2Q2TBE0 894 aaKnown RBP10.37□□□□□ -0.75
MECP2-204ENST00000415944 PRR5LQ6MZQ0 368 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
MECP2-204ENST00000415944 CNBD1Q8NA66 436 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 TMX3Q96JJ7 454 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 NYXQ9GZU5 481 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 LIMCH1Q9UPQ0 1083 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 SRCAPQ6ZRS2 3230 aa10.37□□□□□ -0.75
MECP2-204ENST00000415944 FSD2A1L4K1 749 aa10.36□□□□□ -0.75
MECP2-204ENST00000415944 BAG4O95429 457 aaKnown RBP10.36□□□□□ -0.75
MECP2-204ENST00000415944 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
MECP2-204ENST00000415944 NUTM1Q86Y26 1132 aa10.36□□□□□ -0.75
MECP2-204ENST00000415944 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
MECP2-204ENST00000415944 UTP14AQ9BVJ6 771 aaKnown RBP10.36□□□□□ -0.75
MECP2-204ENST00000415944 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
MECP2-204ENST00000415944 KIF3AQ9Y496 699 aa10.36□□□□□ -0.75
MECP2-204ENST00000415944 CYP46A1Q9Y6A2 500 aa10.36□□□□□ -0.75
MECP2-204ENST00000415944 SH3TC1Q8TE82 1336 aa10.35□□□□□ -0.75
MECP2-204ENST00000415944 CDHR2Q9BYE9 1310 aa10.35□□□□□ -0.75
MECP2-204ENST00000415944 SPEF2Q9C093 1822 aa10.35□□□□□ -0.75
MECP2-204ENST00000415944 LETM1O95202 739 aaPredicted RBP10.35□□□□□ -0.75
MECP2-204ENST00000415944 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
MECP2-204ENST00000415944 ZFYP08048 801 aaPredicted RBP10.35□□□□□ -0.75
MECP2-204ENST00000415944 ST5P78524 1137 aa10.35□□□□□ -0.75
MECP2-204ENST00000415944 ZBTB38Q8NAP3 1195 aaPredicted RBP10.35□□□□□ -0.75
MECP2-204ENST00000415944 MAP4K1Q92918 833 aa10.35□□□□□ -0.75
MECP2-204ENST00000415944 KAZALD1Q96I82 304 aa10.35□□□□□ -0.75
MECP2-204ENST00000415944 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
MECP2-204ENST00000415944 CCDC171Q6TFL3 1326 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 FAM177BA6PVY3 158 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 SASH1O94885 1247 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 BRD1O95696 1058 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 RFX5P48382 616 aaPredicted RBP10.34□□□□□ -0.75
MECP2-204ENST00000415944 CASP7P55210 303 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 PTPN12Q05209 780 aaKnown RBP10.34□□□□□ -0.75
MECP2-204ENST00000415944 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 TNNI3KQ59H18 835 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 BRIP1Q9BX63 1249 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 HELLSQ9NRZ9 838 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 TRMT112Q9UI30 125 aaKnown RBP10.34□□□□□ -0.75
MECP2-204ENST00000415944 CD2APQ9Y5K6 639 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 FPGT-TNNI3KV9GXZ4 949 aa10.34□□□□□ -0.75
MECP2-204ENST00000415944 CACNA1SQ13698 1873 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms