RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
CTHRC1-202ENST00000415886 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
CTHRC1-202ENST00000415886 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
CTHRC1-202ENST00000415886 CHL1O00533 1208 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 ZNF157P51786 506 aaPredicted RBP17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 EYA3Q99504 573 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
CTHRC1-202ENST00000415886 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
CTHRC1-202ENST00000415886 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
CTHRC1-202ENST00000415886 RNF186Q9NXI6 227 aa17.19■□□□□ 0.34
CTHRC1-202ENST00000415886 IRS4O14654 1257 aaPredicted RBP17.18■□□□□ 0.34
CTHRC1-202ENST00000415886 TRPA1O75762 1119 aa17.18■□□□□ 0.34
CTHRC1-202ENST00000415886 SLC10A3P09131 477 aa17.18■□□□□ 0.34
CTHRC1-202ENST00000415886 SOX10P56693 466 aa17.18■□□□□ 0.34
CTHRC1-202ENST00000415886 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
CTHRC1-202ENST00000415886 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
CTHRC1-202ENST00000415886 VIL1P09327 827 aaKnown RBP17.17■□□□□ 0.34
CTHRC1-202ENST00000415886 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
CTHRC1-202ENST00000415886 SULF1Q8IWU6 871 aa17.17■□□□□ 0.34
CTHRC1-202ENST00000415886 TRIM35Q9UPQ4 493 aa17.17■□□□□ 0.34
CTHRC1-202ENST00000415886 CDCA5Q96FF9 252 aa17.16■□□□□ 0.34
CTHRC1-202ENST00000415886 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
CTHRC1-202ENST00000415886 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
CTHRC1-202ENST00000415886 SEC31BQ9NQW1 1179 aa17.16■□□□□ 0.34
CTHRC1-202ENST00000415886 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
CTHRC1-202ENST00000415886 ANP32CO43423 234 aa17.15■□□□□ 0.34
CTHRC1-202ENST00000415886 UFL1O94874 794 aa17.15■□□□□ 0.34
CTHRC1-202ENST00000415886 HOXB7P09629 217 aa17.15■□□□□ 0.34
CTHRC1-202ENST00000415886 RASAL3Q86YV0 1011 aa17.15■□□□□ 0.34
CTHRC1-202ENST00000415886 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
CTHRC1-202ENST00000415886 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
CTHRC1-202ENST00000415886 G3V3G9 751 aa17.14■□□□□ 0.33
CTHRC1-202ENST00000415886 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
CTHRC1-202ENST00000415886 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
CTHRC1-202ENST00000415886 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
CTHRC1-202ENST00000415886 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
CTHRC1-202ENST00000415886 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 SCARF1Q14162 830 aa17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 DUSP27Q5VZP5 1158 aa17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 ZBTB38Q8NAP3 1195 aaPredicted RBP17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 GGA1Q9UJY5 639 aa17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 ZNF609O15014 1411 aa17.13■□□□□ 0.33
CTHRC1-202ENST00000415886 PAPPA2Q9BXP8 1791 aa17.12■□□□□ 0.33
CTHRC1-202ENST00000415886 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
CTHRC1-202ENST00000415886 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
CTHRC1-202ENST00000415886 PSME4Q14997 1843 aa17.12■□□□□ 0.33
CTHRC1-202ENST00000415886 CTU1Q7Z7A3 348 aaKnown RBP17.11■□□□□ 0.33
CTHRC1-202ENST00000415886 AGBL3Q8NEM8 1001 aa17.11■□□□□ 0.33
CTHRC1-202ENST00000415886 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
CTHRC1-202ENST00000415886 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
CTHRC1-202ENST00000415886 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 MYD88Q99836 296 aa17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 MYOZ2Q9NPC6 264 aa17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
CTHRC1-202ENST00000415886 CCDC152Q4G0S7 254 aa17.09■□□□□ 0.33
CTHRC1-202ENST00000415886 GMLQ99445 158 aa17.09■□□□□ 0.33
CTHRC1-202ENST00000415886 XDHP47989 1333 aa17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 PDE8AO60658 829 aa17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 USP17L8P0C7I0 530 aa17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 FKBP1BP68106 108 aa17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 HPS5Q9UPZ3 1129 aa17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.32
CTHRC1-202ENST00000415886 PCCAP05165 728 aaPredicted RBP17.07■□□□□ 0.32
CTHRC1-202ENST00000415886 HSP90B1P14625 803 aaKnown RBP17.07■□□□□ 0.32
CTHRC1-202ENST00000415886 PRAMEF18Q5VWM3 479 aa17.07■□□□□ 0.32
CTHRC1-202ENST00000415886 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
CTHRC1-202ENST00000415886 USP17L3A6NCW0 530 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 USP17L4A6NCW7 530 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 WTIPA6NIX2 430 aaPredicted RBP17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 UBE2Q2LH0YL09 131 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 APAF1O14727 1248 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 USP17L1Q7RTZ2 530 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
CTHRC1-202ENST00000415886 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 ATP2B4P23634 1241 aa17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 NBPF9Q3BBW0 867 aa17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 ZNF296Q8WUU4 475 aaPredicted RBP17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 HDAC9Q9UKV0 1011 aa17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
CTHRC1-202ENST00000415886 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
CTHRC1-202ENST00000415886 SPEF2Q9C093 1822 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms