RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 VIL1P09327 827 aaKnown RBP20.04■□□□□ 0.8
DDX56-202ENST00000415758 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
DDX56-202ENST00000415758 C2orf69Q8N8R5 385 aa20.04■□□□□ 0.8
DDX56-202ENST00000415758 CCDC102AQ96A19 550 aa20.04■□□□□ 0.8
DDX56-202ENST00000415758 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
DDX56-202ENST00000415758 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
DDX56-202ENST00000415758 GBA2Q9HCG7 927 aaPredicted RBP20.04■□□□□ 0.8
DDX56-202ENST00000415758 DOK7Q18PE1 504 aa20.03■□□□□ 0.8
DDX56-202ENST00000415758 ZC3H12CQ9C0D7 883 aaKnown RBP20.03■□□□□ 0.8
DDX56-202ENST00000415758 SAGE1Q9NXZ1 904 aa20.03■□□□□ 0.8
DDX56-202ENST00000415758 MYBBP1AQ9BQG0 1328 aaKnown RBP20.02■□□□□ 0.8
DDX56-202ENST00000415758 DGKZQ13574 1117 aa20.02■□□□□ 0.8
DDX56-202ENST00000415758 DUSP27Q5VZP5 1158 aa20.02■□□□□ 0.8
DDX56-202ENST00000415758 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.8
DDX56-202ENST00000415758 SCN9AQ15858 1988 aa20.02■□□□□ 0.8
DDX56-202ENST00000415758 HSP90B1P14625 803 aaKnown RBP20.01■□□□□ 0.79
DDX56-202ENST00000415758 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
DDX56-202ENST00000415758 RBM26Q5T8P6 1007 aaKnown RBP20.01■□□□□ 0.79
DDX56-202ENST00000415758 ZNF609O15014 1411 aa20.01■□□□□ 0.79
DDX56-202ENST00000415758 ADM5C9JUS6 153 aa20■□□□□ 0.79
DDX56-202ENST00000415758 KIF23Q02241 960 aaPredicted RBP20■□□□□ 0.79
DDX56-202ENST00000415758 KIF4BQ2VIQ3 1234 aa20■□□□□ 0.79
DDX56-202ENST00000415758 ZNF853P0CG23 659 aa19.99■□□□□ 0.79
DDX56-202ENST00000415758 ZNF157P51786 506 aaPredicted RBP19.99■□□□□ 0.79
DDX56-202ENST00000415758 SULF1Q8IWU6 871 aa19.99■□□□□ 0.79
DDX56-202ENST00000415758 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
DDX56-202ENST00000415758 MBIPQ9NS73 344 aa19.99■□□□□ 0.79
DDX56-202ENST00000415758 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
DDX56-202ENST00000415758 ZNF280AP59817 542 aaPredicted RBP19.98■□□□□ 0.79
DDX56-202ENST00000415758 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
DDX56-202ENST00000415758 RIC3Q7Z5B4 369 aa19.98■□□□□ 0.79
DDX56-202ENST00000415758 CCDC191Q8NCU4 936 aa19.98■□□□□ 0.79
DDX56-202ENST00000415758 AGBL3Q8NEM8 1001 aa19.98■□□□□ 0.79
DDX56-202ENST00000415758 SLC10A3P09131 477 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 RNF186Q9NXI6 227 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 GGA3Q9NZ52 723 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 GGA1Q9UJY5 639 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 AKAP11Q9UKA4 1901 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 PSME4Q14997 1843 aa19.97■□□□□ 0.79
DDX56-202ENST00000415758 UFL1O94874 794 aa19.96■□□□□ 0.79
DDX56-202ENST00000415758 PCCAP05165 728 aaPredicted RBP19.96■□□□□ 0.79
DDX56-202ENST00000415758 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
DDX56-202ENST00000415758 RSBN1LQ6PCB5 846 aaPredicted RBP19.96■□□□□ 0.79
DDX56-202ENST00000415758 REM2Q8IYK8 340 aaPredicted RBP19.96■□□□□ 0.79
DDX56-202ENST00000415758 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
DDX56-202ENST00000415758 G3V3G9 751 aa19.95■□□□□ 0.78
DDX56-202ENST00000415758 PDE8AO60658 829 aa19.95■□□□□ 0.78
DDX56-202ENST00000415758 DCAF8Q5TAQ9 597 aa19.95■□□□□ 0.78
DDX56-202ENST00000415758 CDCA5Q96FF9 252 aa19.95■□□□□ 0.78
DDX56-202ENST00000415758 CSRNP1Q96S65 589 aa19.95■□□□□ 0.78
DDX56-202ENST00000415758 GMLQ99445 158 aa19.95■□□□□ 0.78
DDX56-202ENST00000415758 ASTN2O75129 1339 aaPredicted RBP19.95■□□□□ 0.78
DDX56-202ENST00000415758 TRPA1O75762 1119 aa19.94■□□□□ 0.78
DDX56-202ENST00000415758 FKBP1BP68106 108 aa19.94■□□□□ 0.78
DDX56-202ENST00000415758 SCARF1Q14162 830 aa19.94■□□□□ 0.78
DDX56-202ENST00000415758 PODNQ7Z5L7 613 aa19.93■□□□□ 0.78
DDX56-202ENST00000415758 MYD88Q99836 296 aa19.93■□□□□ 0.78
DDX56-202ENST00000415758 IFT57Q9NWB7 429 aa19.93■□□□□ 0.78
DDX56-202ENST00000415758 XDHP47989 1333 aa19.93■□□□□ 0.78
DDX56-202ENST00000415758 PITPNM2Q9BZ72 1349 aa19.93■□□□□ 0.78
DDX56-202ENST00000415758 TNRC18O15417 2968 aaPredicted RBP19.92■□□□□ 0.78
DDX56-202ENST00000415758 USP17L8P0C7I0 530 aa19.92■□□□□ 0.78
DDX56-202ENST00000415758 DDX10Q13206 875 aaKnown RBP19.92■□□□□ 0.78
DDX56-202ENST00000415758 ANGEL2Q5VTE6 544 aaKnown RBP19.92■□□□□ 0.78
DDX56-202ENST00000415758 CWC25Q9NXE8 425 aaPredicted RBP19.92■□□□□ 0.78
DDX56-202ENST00000415758 ATP2B4P23634 1241 aa19.91■□□□□ 0.78
DDX56-202ENST00000415758 GNAI1P63096 354 aa19.91■□□□□ 0.78
DDX56-202ENST00000415758 ANKRD18AQ8IVF6 992 aa19.91■□□□□ 0.78
DDX56-202ENST00000415758 METTL22Q9BUU2 404 aaPredicted RBP19.91■□□□□ 0.78
DDX56-202ENST00000415758 CHMP4AQ9BY43 222 aa19.91■□□□□ 0.78
DDX56-202ENST00000415758 MYOZ2Q9NPC6 264 aa19.91■□□□□ 0.78
DDX56-202ENST00000415758 USP17L3A6NCW0 530 aa19.9■□□□□ 0.78
DDX56-202ENST00000415758 USP17L4A6NCW7 530 aa19.9■□□□□ 0.78
DDX56-202ENST00000415758 CALD1Q05682 793 aaKnown RBP19.9■□□□□ 0.78
DDX56-202ENST00000415758 USP17L1Q7RTZ2 530 aa19.9■□□□□ 0.78
DDX56-202ENST00000415758 RASAL3Q86YV0 1011 aa19.9■□□□□ 0.78
DDX56-202ENST00000415758 PAPPA2Q9BXP8 1791 aa19.9■□□□□ 0.78
DDX56-202ENST00000415758 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
DDX56-202ENST00000415758 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
DDX56-202ENST00000415758 DDX58O95786 925 aaKnown RBP19.89■□□□□ 0.77
DDX56-202ENST00000415758 JARID2Q92833 1246 aaPredicted RBP19.88■□□□□ 0.77
DDX56-202ENST00000415758 APAF1O14727 1248 aa19.87■□□□□ 0.77
DDX56-202ENST00000415758 CCDC30Q5VVM6 783 aa19.87■□□□□ 0.77
DDX56-202ENST00000415758 CTU1Q7Z7A3 348 aaKnown RBP19.87■□□□□ 0.77
DDX56-202ENST00000415758 C8orf58Q8NAV2 365 aa19.87■□□□□ 0.77
DDX56-202ENST00000415758 CCDC85AQ96PX6 553 aaPredicted RBP19.87■□□□□ 0.77
DDX56-202ENST00000415758 CDC5LQ99459 802 aaKnown RBP19.87■□□□□ 0.77
DDX56-202ENST00000415758 BSDC1Q9NW68 430 aaPredicted RBP19.87■□□□□ 0.77
DDX56-202ENST00000415758 MED23Q9ULK4 1368 aa19.86■□□□□ 0.77
DDX56-202ENST00000415758 TTLL11Q8NHH1 800 aa19.86■□□□□ 0.77
DDX56-202ENST00000415758 MINPP1Q9UNW1 487 aa19.86■□□□□ 0.77
DDX56-202ENST00000415758 WTIPA6NIX2 430 aaPredicted RBP19.85■□□□□ 0.77
DDX56-202ENST00000415758 MMP14P50281 582 aa19.85■□□□□ 0.77
DDX56-202ENST00000415758 CTSWP56202 376 aa19.85■□□□□ 0.77
DDX56-202ENST00000415758 KSR2Q6VAB6 950 aa19.85■□□□□ 0.77
DDX56-202ENST00000415758 MAP3K2Q9Y2U5 619 aa19.85■□□□□ 0.77
DDX56-202ENST00000415758 ZNF646O15015 1829 aaPredicted RBP19.84■□□□□ 0.77
DDX56-202ENST00000415758 IGKV5-2P06315 115 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms